24 items (Daphnia pulex) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FYW4_DAPPU	Uncharacterized protein. (182 aa)
	E9FX26_DAPPU	Uncharacterized protein. (488 aa)
	E9FW73_DAPPU	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (598 aa)
	E9FU34_DAPPU	Uncharacterized protein. (144 aa)
	E9FSV7_DAPPU	Uncharacterized protein. (249 aa)
	E9FSV2_DAPPU	Uncharacterized protein. (454 aa)
	E9FR75_DAPPU	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (591 aa)
	E9GTM7_DAPPU	SEC63 domain-containing protein. (218 aa)
	E9GSF7_DAPPU	Uncharacterized protein. (194 aa)
	EOG090X03VW	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (506 aa)
	EOG090X0OQY	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (78 aa)
	EOG090X03O4	EOG090X03O4. (476 aa)
	E9HAP9_DAPPU	Uncharacterized protein. (105 aa)
	E9HLU4_DAPPU	Uncharacterized protein. (149 aa)
	E9HMB6_DAPPU	Uncharacterized protein. (112 aa)
	E9I392_DAPPU	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (266 aa)
	E9I5Q2_DAPPU	Uncharacterized protein. (223 aa)
	E9H1A8_DAPPU	Ubiquitin-like domain-containing protein. (134 aa)
	E9GJF6_DAPPU	Uncharacterized protein. (68 aa)
	EOG090X0RAK	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (100 aa)
	E9G6J2_DAPPU	SRP54 domain-containing protein. (621 aa)
	E9G3B0_DAPPU	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (670 aa)
	E9G1G4_DAPPU	Signal peptidase complex subunit 3. (180 aa)
	E9G0L2_DAPPU	J domain-containing protein. (747 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FR75_DAPPU	E9I392_DAPPU	E9FR75	E9I392	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.906
E9FSV7_DAPPU	E9FW73_DAPPU	E9FSV7	E9FW73	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.962
E9FSV7_DAPPU	E9G0L2_DAPPU	E9FSV7	E9G0L2	Uncharacterized protein.	J domain-containing protein.	0.625
E9FSV7_DAPPU	E9G3B0_DAPPU	E9FSV7	E9G3B0	Uncharacterized protein.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.957
E9FSV7_DAPPU	E9G6J2_DAPPU	E9FSV7	E9G6J2	Uncharacterized protein.	SRP54 domain-containing protein.	0.998
E9FSV7_DAPPU	E9GJF6_DAPPU	E9FSV7	E9GJF6	Uncharacterized protein.	Uncharacterized protein.	0.561
E9FSV7_DAPPU	E9GSF7_DAPPU	E9FSV7	E9GSF7	Uncharacterized protein.	Uncharacterized protein.	0.660
E9FSV7_DAPPU	E9GTM7_DAPPU	E9FSV7	E9GTM7	Uncharacterized protein.	SEC63 domain-containing protein.	0.625
E9FSV7_DAPPU	E9HAP9_DAPPU	E9FSV7	E9HAP9	Uncharacterized protein.	Uncharacterized protein.	0.471
E9FSV7_DAPPU	E9HLU4_DAPPU	E9FSV7	E9HLU4	Uncharacterized protein.	Uncharacterized protein.	0.953
E9FSV7_DAPPU	E9HMB6_DAPPU	E9FSV7	E9HMB6	Uncharacterized protein.	Uncharacterized protein.	0.927
E9FSV7_DAPPU	E9I5Q2_DAPPU	E9FSV7	E9I5Q2	Uncharacterized protein.	Uncharacterized protein.	0.559
E9FSV7_DAPPU	EOG090X03O4	E9FSV7	E9H9N3	Uncharacterized protein.	EOG090X03O4.	0.718
E9FSV7_DAPPU	EOG090X03VW	E9FSV7	E9H4K5	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.966
E9FSV7_DAPPU	EOG090X0OQY	E9FSV7	E9H7M0	Uncharacterized protein.	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.	0.864
E9FSV7_DAPPU	EOG090X0RAK	E9FSV7	E9GAT4	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.464
E9FU34_DAPPU	E9GSF7_DAPPU	E9FU34	E9GSF7	Uncharacterized protein.	Uncharacterized protein.	0.483
E9FW73_DAPPU	E9FSV7_DAPPU	E9FW73	E9FSV7	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Uncharacterized protein.	0.962
E9FW73_DAPPU	E9FX26_DAPPU	E9FW73	E9FX26	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Uncharacterized protein.	0.603
E9FW73_DAPPU	E9G0L2_DAPPU	E9FW73	E9G0L2	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	J domain-containing protein.	0.620