(13 nodes) Stem cell proliferation network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FSU8_DAPPU	Transcriptional factor scalloped, isoform 2. (571 aa)
	E9G082_DAPPU	Uncharacterized protein. (553 aa)
	E9G0C6_DAPPU	Uncharacterized protein. (242 aa)
	E9G0L6_DAPPU	PDZ domain-containing protein. (77 aa)
	E9GCY5_DAPPU	Uncharacterized protein. (455 aa)
	E9GGG7_DAPPU	Uncharacterized protein. (122 aa)
	E9GI23_DAPPU	Uncharacterized protein. (493 aa)
	E9GMQ0_DAPPU	DUF3668 domain-containing protein. (503 aa)
	E9GPZ4_DAPPU	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (453 aa)
	E9GUA8_DAPPU	Tudor domain-containing protein. (252 aa)
	E9HA35_DAPPU	Uncharacterized protein. (1847 aa)
	E9HCY1_DAPPU	Uncharacterized protein. (433 aa)
	E9HM46_DAPPU	Uncharacterized protein. (178 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FSU8_DAPPU	E9GI23_DAPPU	E9FSU8	E9GI23	Transcriptional factor scalloped, isoform 2.	Uncharacterized protein.	0.473
E9FSU8_DAPPU	E9GPZ4_DAPPU	E9FSU8	E9GPZ4	Transcriptional factor scalloped, isoform 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.632
E9FSU8_DAPPU	E9HCY1_DAPPU	E9FSU8	E9HCY1	Transcriptional factor scalloped, isoform 2.	Uncharacterized protein.	0.990
E9FSU8_DAPPU	E9HM46_DAPPU	E9FSU8	E9HM46	Transcriptional factor scalloped, isoform 2.	Uncharacterized protein.	0.592
E9GI23_DAPPU	E9FSU8_DAPPU	E9GI23	E9FSU8	Uncharacterized protein.	Transcriptional factor scalloped, isoform 2.	0.473
E9GI23_DAPPU	E9GPZ4_DAPPU	E9GI23	E9GPZ4	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.972
E9GI23_DAPPU	E9HCY1_DAPPU	E9GI23	E9HCY1	Uncharacterized protein.	Uncharacterized protein.	0.962
E9GI23_DAPPU	E9HM46_DAPPU	E9GI23	E9HM46	Uncharacterized protein.	Uncharacterized protein.	0.998
E9GPZ4_DAPPU	E9FSU8_DAPPU	E9GPZ4	E9FSU8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Transcriptional factor scalloped, isoform 2.	0.632
E9GPZ4_DAPPU	E9GI23_DAPPU	E9GPZ4	E9GI23	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.972
E9GPZ4_DAPPU	E9HCY1_DAPPU	E9GPZ4	E9HCY1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.987
E9GPZ4_DAPPU	E9HM46_DAPPU	E9GPZ4	E9HM46	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.969
E9HCY1_DAPPU	E9FSU8_DAPPU	E9HCY1	E9FSU8	Uncharacterized protein.	Transcriptional factor scalloped, isoform 2.	0.990
E9HCY1_DAPPU	E9GI23_DAPPU	E9HCY1	E9GI23	Uncharacterized protein.	Uncharacterized protein.	0.962
E9HCY1_DAPPU	E9GPZ4_DAPPU	E9HCY1	E9GPZ4	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.987
E9HCY1_DAPPU	E9HM46_DAPPU	E9HCY1	E9HM46	Uncharacterized protein.	Uncharacterized protein.	0.890
E9HM46_DAPPU	E9FSU8_DAPPU	E9HM46	E9FSU8	Uncharacterized protein.	Transcriptional factor scalloped, isoform 2.	0.592
E9HM46_DAPPU	E9GI23_DAPPU	E9HM46	E9GI23	Uncharacterized protein.	Uncharacterized protein.	0.998
E9HM46_DAPPU	E9GPZ4_DAPPU	E9HM46	E9GPZ4	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.969
E9HM46_DAPPU	E9HCY1_DAPPU	E9HM46	E9HCY1	Uncharacterized protein.	Uncharacterized protein.	0.890