(16 nodes) Longin-like domain superfamily network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9G6J2_DAPPU	SRP54 domain-containing protein. (621 aa)
	E9HS18_DAPPU	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
	E9HDE8_DAPPU	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (425 aa)
	E9HCT6_DAPPU	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (217 aa)
	E9H712_DAPPU	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (217 aa)
	E9H6T3_DAPPU	Clat_adaptor_s domain-containing protein. (189 aa)
	E9H019_DAPPU	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (178 aa)
	EOG090X0HJH	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (142 aa)
	E9GMN9_DAPPU	Uncharacterized protein. (140 aa)
	EOG090X0E6P	EOG090X0E6P; Belongs to the synaptobrevin family. (200 aa)
	E9GIN4_DAPPU	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	E9G235_DAPPU	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (422 aa)
	E9FYM6_DAPPU	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (434 aa)
	E9FW38_DAPPU	Uncharacterized protein; Belongs to the synaptobrevin family. (213 aa)
	E9FTF0_DAPPU	Uncharacterized protein. (142 aa)
	E9FRH1_DAPPU	Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FRH1_DAPPU	E9FW38_DAPPU	E9FRH1	E9FW38	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.841
E9FRH1_DAPPU	E9FYM6_DAPPU	E9FRH1	E9FYM6	Uncharacterized protein; Belongs to the synaptobrevin family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.644
E9FRH1_DAPPU	E9G235_DAPPU	E9FRH1	E9G235	Uncharacterized protein; Belongs to the synaptobrevin family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.641
E9FRH1_DAPPU	E9GIN4_DAPPU	E9FRH1	E9GIN4	Uncharacterized protein; Belongs to the synaptobrevin family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.646
E9FRH1_DAPPU	E9H6T3_DAPPU	E9FRH1	E9H6T3	Uncharacterized protein; Belongs to the synaptobrevin family.	Clat_adaptor_s domain-containing protein.	0.596
E9FRH1_DAPPU	E9HDE8_DAPPU	E9FRH1	E9HDE8	Uncharacterized protein; Belongs to the synaptobrevin family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.475
E9FRH1_DAPPU	E9HS18_DAPPU	E9FRH1	E9HS18	Uncharacterized protein; Belongs to the synaptobrevin family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.556
E9FRH1_DAPPU	EOG090X0E6P	E9FRH1	E9GLK9	Uncharacterized protein; Belongs to the synaptobrevin family.	EOG090X0E6P; Belongs to the synaptobrevin family.	0.716
E9FTF0_DAPPU	E9FW38_DAPPU	E9FTF0	E9FW38	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.644
E9FTF0_DAPPU	E9GMN9_DAPPU	E9FTF0	E9GMN9	Uncharacterized protein.	Uncharacterized protein.	0.997
E9FTF0_DAPPU	E9H712_DAPPU	E9FTF0	E9H712	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.989
E9FTF0_DAPPU	E9HCT6_DAPPU	E9FTF0	E9HCT6	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.989
E9FTF0_DAPPU	EOG090X0HJH	E9FTF0	E9GZ16	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.998
E9FW38_DAPPU	E9FRH1_DAPPU	E9FW38	E9FRH1	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.841
E9FW38_DAPPU	E9FTF0_DAPPU	E9FW38	E9FTF0	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.644
E9FW38_DAPPU	E9GMN9_DAPPU	E9FW38	E9GMN9	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.773
E9FW38_DAPPU	E9H019_DAPPU	E9FW38	E9H019	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.822
E9FW38_DAPPU	E9H712_DAPPU	E9FW38	E9H712	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.645
E9FW38_DAPPU	E9HCT6_DAPPU	E9FW38	E9HCT6	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.645
E9FW38_DAPPU	EOG090X0E6P	E9FW38	E9GLK9	Uncharacterized protein; Belongs to the synaptobrevin family.	EOG090X0E6P; Belongs to the synaptobrevin family.	0.996