(23 nodes) SNARE interactions in vesicular transport network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FQX9_DAPPU	t-SNARE coiled-coil homology domain-containing protein. (227 aa)
	E9FRH1_DAPPU	Uncharacterized protein; Belongs to the synaptobrevin family. (222 aa)
	E9FUW4_DAPPU	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (343 aa)
	EOG090X0GIP	EOG090X0GIP; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (213 aa)
	E9FW19_DAPPU	t-SNARE coiled-coil homology domain-containing protein. (322 aa)
	E9FW38_DAPPU	Uncharacterized protein; Belongs to the synaptobrevin family. (213 aa)
	EOG090X0EO1	EOG090X0EO1. (226 aa)
	E9G4H7_DAPPU	Syntaxin-18_N domain-containing protein. (316 aa)
	E9G574_DAPPU	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (237 aa)
	EOG090X0AQP	EOG090X0AQP; Belongs to the syntaxin family. (311 aa)
	EOG090X0MTI	EOG090X0MTI. (281 aa)
	E9GCU4_DAPPU	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (270 aa)
	E9GGY4_DAPPU	Uncharacterized protein. (250 aa)
	E9GL02_DAPPU	t-SNARE coiled-coil homology domain-containing protein. (240 aa)
	EOG090X0E6P	EOG090X0E6P; Belongs to the synaptobrevin family. (200 aa)
	E9H229_DAPPU	Syntaxin; Belongs to the syntaxin family. (308 aa)
	E9H6D2_DAPPU	V-SNARE coiled-coil homology domain-containing protein. (135 aa)
	E9H9D9_DAPPU	V-SNARE coiled-coil homology domain-containing protein. (85 aa)
	E9H9E1_DAPPU	V-SNARE coiled-coil homology domain-containing protein. (85 aa)
	E9HCD8_DAPPU	t-SNARE coiled-coil homology domain-containing protein. (104 aa)
	E9HJP9_DAPPU	Syntaxin; Belongs to the syntaxin family. (294 aa)
	E9HKI1_DAPPU	V-SNARE coiled-coil homology domain-containing protein. (132 aa)
	E9I204_DAPPU	V-SNARE domain-containing protein. (174 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FQX9_DAPPU	E9FRH1_DAPPU	E9FQX9	E9FRH1	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.870
E9FQX9_DAPPU	E9FUW4_DAPPU	E9FQX9	E9FUW4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.977
E9FQX9_DAPPU	E9FW19_DAPPU	E9FQX9	E9FW19	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.871
E9FQX9_DAPPU	E9FW38_DAPPU	E9FQX9	E9FW38	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.969
E9FQX9_DAPPU	E9G4H7_DAPPU	E9FQX9	E9G4H7	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin-18_N domain-containing protein.	0.828
E9FQX9_DAPPU	E9G574_DAPPU	E9FQX9	E9G574	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.823
E9FQX9_DAPPU	E9GCU4_DAPPU	E9FQX9	E9GCU4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.976
E9FQX9_DAPPU	E9GGY4_DAPPU	E9FQX9	E9GGY4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.753
E9FQX9_DAPPU	E9GL02_DAPPU	E9FQX9	E9GL02	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.996
E9FQX9_DAPPU	E9H229_DAPPU	E9FQX9	E9H229	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin; Belongs to the syntaxin family.	0.667
E9FQX9_DAPPU	E9H6D2_DAPPU	E9FQX9	E9H6D2	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.990
E9FQX9_DAPPU	E9H9D9_DAPPU	E9FQX9	E9H9D9	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.540
E9FQX9_DAPPU	E9H9E1_DAPPU	E9FQX9	E9H9E1	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.540
E9FQX9_DAPPU	E9HCD8_DAPPU	E9FQX9	E9HCD8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.815
E9FQX9_DAPPU	E9HJP9_DAPPU	E9FQX9	E9HJP9	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin; Belongs to the syntaxin family.	0.667
E9FQX9_DAPPU	E9HKI1_DAPPU	E9FQX9	E9HKI1	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.932
E9FQX9_DAPPU	E9I204_DAPPU	E9FQX9	E9I204	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE domain-containing protein.	0.960
E9FQX9_DAPPU	EOG090X0AQP	E9FQX9	E9G6T4	t-SNARE coiled-coil homology domain-containing protein.	EOG090X0AQP; Belongs to the syntaxin family.	0.993
E9FQX9_DAPPU	EOG090X0E6P	E9FQX9	E9GLK9	t-SNARE coiled-coil homology domain-containing protein.	EOG090X0E6P; Belongs to the synaptobrevin family.	0.994
E9FQX9_DAPPU	EOG090X0EO1	E9FQX9	E9G255	t-SNARE coiled-coil homology domain-containing protein.	EOG090X0EO1.	0.569