STRINGSTRING
hisP2 hisP2 artJ artJ artQ-2 artQ-2 artM-2 artM-2 artJ2 artJ2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hisP2ABC transporter, ATP-binding protein; COG: COG4161; Pfam: PF00005; InterPro: IPR003593. (249 aa)
artJLysine-arginine-ornithine-binding periplasmic protein; COG: COG0834; Pfam: PF00497; InterPro: IPR005768; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artQ-2Arginine ABC transporter permease protein ArtQ; COG: COG4215; Pfam: PF00528; InterPro: IPR000515. (238 aa)
artM-2Arginine ABC transporter permease protein ArtM; COG: COG4160; Pfam: PF00528; InterPro: IPR000515. (222 aa)
artJ2Lysine-arginine-ornithine-binding periplasmic protein; COG: COG0834; Pfam: PF00497; InterPro: IPR005768; Belongs to the bacterial solute-binding protein 3 family. (255 aa)
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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