STRINGSTRING
C7M84_017396 C7M84_017396 C7M84_016050 C7M84_016050 C7M84_016877 C7M84_016877 C7M84_015627 C7M84_015627 C7M84_012157 C7M84_012157 C7M84_011608 C7M84_011608 C7M84_014278 C7M84_014278 C7M84_012081 C7M84_012081 C7M84_009129 C7M84_009129 C7M84_006830 C7M84_006830 C7M84_000373 C7M84_000373 C7M84_003879 C7M84_003879 C7M84_019410 C7M84_019410 C7M84_023427 C7M84_023427 C7M84_002514 C7M84_002514 C7M84_022238 C7M84_022238 C7M84_001534 C7M84_001534 C7M84_000843 C7M84_000843 C7M84_016194 C7M84_016194 C7M84_013936 C7M84_013936 C7M84_021409 C7M84_021409 C7M84_008268 C7M84_008268 C7M84_004078 C7M84_004078 C7M84_000672 C7M84_000672 C7M84_000037 C7M84_000037 C7M84_000003 C7M84_000003 C7M84_019364 C7M84_019364 C7M84_014936 C7M84_014936 C7M84_004411 C7M84_004411 C7M84_004070 C7M84_004070 C7M84_003261 C7M84_003261 C7M84_017605 C7M84_017605 C7M84_020791 C7M84_020791 C7M84_018576 C7M84_018576 C7M84_017569 C7M84_017569 C7M84_017769 C7M84_017769 C7M84_010219 C7M84_010219 C7M84_013916 C7M84_013916 C7M84_012299 C7M84_012299 C7M84_010281 C7M84_010281 C7M84_004408 C7M84_004408 LSM4 LSM4 C7M84_002322 C7M84_002322 C7M84_000454 C7M84_000454 C7M84_024717 C7M84_024717 C7M84_023824 C7M84_023824 C7M84_003459 C7M84_003459 C7M84_001464 C7M84_001464 C7M84_019143 C7M84_019143 C7M84_025577 C7M84_025577 C7M84_008862 C7M84_008862 C7M84_006088 C7M84_006088 C7M84_004367 C7M84_004367 C7M84_003789 C7M84_003789 C7M84_000349 C7M84_000349 C7M84_023210 C7M84_023210 C7M84_001023 C7M84_001023 C7M84_015333 C7M84_015333 C7M84_007186 C7M84_007186 C7M84_004076 C7M84_004076 C7M84_002007 C7M84_002007 C7M84_021464 C7M84_021464 C7M84_020053 C7M84_020053 C7M84_019992 C7M84_019992 C7M84_018178 C7M84_018178 C7M84_015324 C7M84_015324 C7M84_014830 C7M84_014830 C7M84_014034 C7M84_014034 C7M84_013674 C7M84_013674 C7M84_012763 C7M84_012763 C7M84_010151 C7M84_010151 C7M84_009968 C7M84_009968 C7M84_009696 C7M84_009696 C7M84_009508 C7M84_009508 LSM5 LSM5 C7M84_007940 C7M84_007940 C7M84_007152 C7M84_007152 C7M84_007210 C7M84_007210 C7M84_006704 C7M84_006704 C7M84_006194 C7M84_006194 C7M84_006156 C7M84_006156 C7M84_005066 C7M84_005066 C7M84_004409 C7M84_004409 C7M84_004330 C7M84_004330 C7M84_004151 C7M84_004151 LSM3 LSM3 C7M84_004077 C7M84_004077 C7M84_004033 C7M84_004033 C7M84_001977 C7M84_001977 C7M84_001773 C7M84_001773 C7M84_001605 C7M84_001605 C7M84_025348 C7M84_025348 C7M84_025275 C7M84_025275 C7M84_024820 C7M84_024820 C7M84_024306 C7M84_024306 C7M84_023774 C7M84_023774 C7M84_023499 C7M84_023499 C7M84_023282 C7M84_023282 C7M84_023283 C7M84_023283 C7M84_022952 C7M84_022952 C7M84_022922 C7M84_022922 C7M84_022725 C7M84_022725 C7M84_022707 C7M84_022707 C7M84_021332 C7M84_021332 C7M84_008250 C7M84_008250 C7M84_003529 C7M84_003529 C7M84_006562 C7M84_006562
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_017396Uncharacterized protein. (375 aa)
C7M84_016050Elongation factor Tu GTP-binding domain protein 2. (919 aa)
C7M84_016877Uncharacterized protein. (920 aa)
C7M84_015627Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
C7M84_012157Putative splicing factor 3B subunit 4. (431 aa)
C7M84_011608Putative N-alpha-acetyltransferase 38, NatC auxiliary subunit. (73 aa)
C7M84_014278Matrin-type domain-containing protein. (330 aa)
C7M84_012081Putative polyglutamine-binding protein 1. (301 aa)
C7M84_009129Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (94 aa)
C7M84_006830Uncharacterized protein. (361 aa)
C7M84_000373Putative CD2 antigen cytoplasmic tail-binding protein 2-like isoform X1. (358 aa)
C7M84_003879U4/U6 small nuclear ribonucleoprotein Prp3. (665 aa)
C7M84_019410WD40 repeat-containing protein SMU1. (513 aa)
C7M84_023427Putative pre-mRNA-splicing factor 18 isoform X1. (348 aa)
C7M84_002514Squamous cell carcinoma antigen recognized by T-cells 3. (821 aa)
C7M84_022238Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (183 aa)
C7M84_001534SH2 domain-containing adapter protein F. (668 aa)
C7M84_000843Putative splicing factor 3A subunit 1 isoform X1. (748 aa)
C7M84_016194Putative RNA-binding protein 40-like. (481 aa)
C7M84_013936Putative adhesive plaque matrix protein-like. (777 aa)
C7M84_021409Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (744 aa)
C7M84_008268Small nuclear ribonucleoprotein polypeptide G. (332 aa)
C7M84_004078Putative transcription elongation regulator 1-like isoform X3. (295 aa)
C7M84_000672Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (291 aa)
C7M84_000037Putative WW domain-binding protein 11. (646 aa)
C7M84_000003Putative serine/arginine repetitive matrix protein 2 isoform X4. (80 aa)
C7M84_019364Pre-mRNA-processing-splicing factor 8. (2305 aa)
C7M84_014936Putative serine/threonine-protein kinase PRP4-like. (335 aa)
C7M84_004411Putative smad nuclear-interacting protein 1. (315 aa)
C7M84_004070Pre-mRNA-splicing factor RBM22. (451 aa)
C7M84_003261Small nuclear ribonucleoprotein Sm D3. (128 aa)
C7M84_017605Uncharacterized protein; Belongs to the DEAD box helicase family. (737 aa)
C7M84_020791Cell division cycle 5-like protein. (807 aa)
C7M84_018576Pre-mRNA-splicing factor SPF27. (153 aa)
C7M84_017569Survival of motor neuron-related-splicing factor 30. (243 aa)
C7M84_017769Putative U4/U6 small nuclear ribonucleoprotein Prp4. (508 aa)
C7M84_010219Putative striatin. (185 aa)
C7M84_013916CWF19-like protein 2. (913 aa)
C7M84_012299Putative XPA-binding protein. (820 aa)
C7M84_010281Uncharacterized protein. (407 aa)
C7M84_004408Putative smad nuclear-interacting protein 1. (343 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (83 aa)
C7M84_002322Splicing factor 3B subunit 3. (573 aa)
C7M84_000454U4/U6 small nuclear ribonucleoprotein Prp31. (505 aa)
C7M84_024717U2 snRNP-associated SURP motif-containing protein. (1145 aa)
C7M84_023824Uncharacterized protein. (1738 aa)
C7M84_003459Putative HIV Tat-specific factor 1-like. (339 aa)
C7M84_001464Pre-mRNA-splicing factor SLU7. (273 aa)
C7M84_019143Putative zinc finger matrin-type protein 2. (203 aa)
C7M84_025577Putative ubiquitin-like protein 5 isoform X2. (113 aa)
C7M84_008862Putative U5 small nuclear ribonucleoprotein 40 kDa protein. (157 aa)
C7M84_006088Uncharacterized protein. (412 aa)
C7M84_004367Uncharacterized protein. (478 aa)
C7M84_003789RED_N domain-containing protein. (663 aa)
C7M84_000349Putative ATP-dependent RNA helicase DDX46. (981 aa)
C7M84_023210BUD31-like. (144 aa)
C7M84_001023Pre-mRNA-splicing factor. (1382 aa)
C7M84_015333Putative pre-mRNA-processing factor 19-like. (500 aa)
C7M84_007186Uncharacterized protein. (791 aa)
C7M84_004076Transcription elongation regulator 1. (342 aa)
C7M84_002007Putative XPA-binding protein. (540 aa)
C7M84_021464Uncharacterized protein. (1794 aa)
C7M84_020053Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (650 aa)
C7M84_019992Putative pre-mRNA-splicing factor 38A-like. (466 aa)
C7M84_018178Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (189 aa)
C7M84_015324Pre-mRNA-splicing factor CWC22-like protein. (152 aa)
C7M84_014830Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (512 aa)
C7M84_014034Male reproductive-related microfibril-associated protein. (456 aa)
C7M84_013674Putative crooked neck-like protein 1-like. (723 aa)
C7M84_012763Putative G patch domain and KOW motifs-containing protein. (666 aa)
C7M84_010151Uncharacterized protein. (196 aa)
C7M84_009968Coiled-coil domain-containing protein 94. (351 aa)
C7M84_009696WD_REPEATS_REGION domain-containing protein. (208 aa)
C7M84_009508U2 small nuclear ribonucleoprotein A. (247 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (88 aa)
C7M84_007940Intron-binding protein aquarius. (1406 aa)
C7M84_007152Serine/threonine-protein phosphatase 1 regulatory subunit 10. (589 aa)
C7M84_007210Putative puff-specific protein Bx42-like. (519 aa)
C7M84_006704Pre-mRNA-processing factor 6. (933 aa)
C7M84_006194Putative pre-mRNA-splicing factor CWC25-like isoform X1. (344 aa)
C7M84_006156Putative splicing factor 3A subunit 1-like. (244 aa)
C7M84_005066Putative splicing factor 3B subunit 1 isoform X1. (1312 aa)
C7M84_004409Putative pre-mRNA-splicing factor ISY1-like. (268 aa)
C7M84_004330U4/U6 small nuclear ribonucleoprotein Prp3. (388 aa)
C7M84_004151Uncharacterized protein. (1090 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
C7M84_004077Putative transcription elongation regulator. (516 aa)
C7M84_004033RRM domain-containing protein. (1142 aa)
C7M84_001977WD_REPEATS_REGION domain-containing protein. (571 aa)
C7M84_001773Putative peptidyl-prolyl cis-trans isomerase CWC27-like isoform X2. (398 aa)
C7M84_001605U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
C7M84_025348Putative ATP-dependent RNA helicase DHX8. (1082 aa)
C7M84_025275Splicing factor 3A subunit 2. (356 aa)
C7M84_024820C3H1-type domain-containing protein. (348 aa)
C7M84_024306Putative poly(U)-binding-splicing factor half pint isoform X2. (469 aa)
C7M84_023774Putative pre-mRNA-splicing factor ATP-dependent RNA helicase prp22. (985 aa)
C7M84_023499U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (120 aa)
C7M84_023282Calcium homeostasis endoplasmic reticulum protein. (537 aa)
C7M84_023283G-patch domain-containing protein. (380 aa)
C7M84_022952Beta-catenin-like protein 1. (542 aa)
C7M84_022922Dynein heavy chain. (375 aa)
C7M84_022725Putative ATP-dependent RNA helicase YTHDC2. (803 aa)
C7M84_022707Putative U6 snRNA-associated Sm-like protein LSm7. (140 aa)
C7M84_021332Putative splicing factor 3B subunit 2 isoform X3. (739 aa)
C7M84_008250Putative RNA-binding motif protein, X-linked 2-like. (285 aa)
C7M84_003529Putative U1 small nuclear ribonucleoprotein A. (253 aa)
C7M84_006562Small nuclear ribonucleoprotein G. (77 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.