STRINGSTRING
C7M84_017396 C7M84_017396 C7M84_006830 C7M84_006830 C7M84_017605 C7M84_017605 C7M84_017569 C7M84_017569 C7M84_024717 C7M84_024717 C7M84_023824 C7M84_023824 C7M84_003459 C7M84_003459 C7M84_004367 C7M84_004367 C7M84_007152 C7M84_007152 C7M84_024306 C7M84_024306 C7M84_023282 C7M84_023282 C7M84_023283 C7M84_023283 C7M84_022922 C7M84_022922
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_017396Uncharacterized protein. (375 aa)
C7M84_006830Uncharacterized protein. (361 aa)
C7M84_017605Uncharacterized protein; Belongs to the DEAD box helicase family. (737 aa)
C7M84_017569Survival of motor neuron-related-splicing factor 30. (243 aa)
C7M84_024717U2 snRNP-associated SURP motif-containing protein. (1145 aa)
C7M84_023824Uncharacterized protein. (1738 aa)
C7M84_003459Putative HIV Tat-specific factor 1-like. (339 aa)
C7M84_004367Uncharacterized protein. (478 aa)
C7M84_007152Serine/threonine-protein phosphatase 1 regulatory subunit 10. (589 aa)
C7M84_024306Putative poly(U)-binding-splicing factor half pint isoform X2. (469 aa)
C7M84_023282Calcium homeostasis endoplasmic reticulum protein. (537 aa)
C7M84_023283G-patch domain-containing protein. (380 aa)
C7M84_022922Dynein heavy chain. (375 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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