STRINGSTRING
C7M84_018164 C7M84_018164 C7M84_019095 C7M84_019095 C7M84_022640 C7M84_022640 C7M84_021613 C7M84_021613 C7M84_018796 C7M84_018796 C7M84_012981 C7M84_012981 C7M84_023446 C7M84_023446 C7M84_014328 C7M84_014328
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_018164Uncharacterized protein. (652 aa)
C7M84_019095Uncharacterized protein. (2862 aa)
C7M84_022640Btz domain-containing protein. (770 aa)
C7M84_021613Histone deacetylase complex subunit SAP18. (92 aa)
C7M84_018796Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (453 aa)
C7M84_012981RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (163 aa)
C7M84_023446Mago-nashi. (147 aa)
C7M84_014328Putative RNA-binding protein with serine-rich domain 1-B. (307 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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