STRINGSTRING
C7M84_006297 C7M84_006297 C7M84_004360 C7M84_004360 C7M84_004290 C7M84_004290 C7M84_004291 C7M84_004291 C7M84_004289 C7M84_004289
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_006297Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (471 aa)
C7M84_004360Uncharacterized protein. (331 aa)
C7M84_004290Putative Paired AMPhipathic helix protein Sin3A. (415 aa)
C7M84_004291Uncharacterized protein. (400 aa)
C7M84_004289Putative Paired AMPhipathic helix protein Sin3A. (582 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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