STRINGSTRING
C7M84_016042 C7M84_016042 C7M84_022086 C7M84_022086 C7M84_020534 C7M84_020534 C7M84_010814 C7M84_010814 C7M84_007992 C7M84_007992 C7M84_016043 C7M84_016043
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_016042Acetyl-coA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (257 aa)
C7M84_022086Putative trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family. (472 aa)
C7M84_020534Acetyl-coA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (412 aa)
C7M84_010814Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
C7M84_007992Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
C7M84_016043H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (269 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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