STRINGSTRING
C7M84_013824 C7M84_013824 C7M84_014785 C7M84_014785 C7M84_011818 C7M84_011818 C7M84_011059 C7M84_011059 C7M84_019443 C7M84_019443 C7M84_018801 C7M84_018801 C7M84_016938 C7M84_016938 C7M84_016939 C7M84_016939 C7M84_024489 C7M84_024489 C7M84_007940 C7M84_007940 C7M84_010856 C7M84_010856
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C7M84_013824Putative helicase senataxin. (2185 aa)
C7M84_014785AAA_12 domain-containing protein. (400 aa)
C7M84_011818Putative DNA-binding protein SMUBP-2. (499 aa)
C7M84_011059Putative DNA replication ATP-dependent helicase/nuclease DNA2-like. (1234 aa)
C7M84_019443Helicase with zinc finger. (1660 aa)
C7M84_018801NFX1-type zinc finger-containing protein 1. (1019 aa)
C7M84_016938Regulator of nonsense transcripts 1. (980 aa)
C7M84_016939Regulator of nonsense transcripts 1. (423 aa)
C7M84_024489Putative DNA-binding protein SMUBP-2-like isoform X1. (690 aa)
C7M84_007940Intron-binding protein aquarius. (1406 aa)
C7M84_010856RNA helicase. (915 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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