STRINGSTRING
APH-1 APH-1 C7M84_008338 C7M84_008338 C7M84_006297 C7M84_006297 C7M84_001719 C7M84_001719 C7M84_023545 C7M84_023545 C7M84_020125 C7M84_020125 C7M84_024611 C7M84_024611 C7M84_007551 C7M84_007551 C7M84_024140 C7M84_024140 C7M84_017680 C7M84_017680 C7M84_011703 C7M84_011703 C7M84_008269 C7M84_008269 C7M84_006145 C7M84_006145 C7M84_005693 C7M84_005693 C7M84_002625 C7M84_002625
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APH-1Putative gamma-secretase subunit Aph-1-like. (258 aa)
C7M84_008338Putative transducin-like enhancer protein 3 isoformX5. (363 aa)
C7M84_006297Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (471 aa)
C7M84_001719Suppressor of hairless protein. (499 aa)
C7M84_023545Protein numb. (612 aa)
C7M84_020125Putative transcription factor hey. (477 aa)
C7M84_024611ADAM17 protein. (804 aa)
C7M84_007551Putative CREB-binding protein isoform X5. (2040 aa)
C7M84_024140C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (431 aa)
C7M84_017680Uncharacterized protein. (902 aa)
C7M84_011703Histone acetyltransferase KAT2A. (831 aa)
C7M84_008269Uncharacterized protein. (149 aa)
C7M84_006145Fringe. (219 aa)
C7M84_005693Nicastrin. (700 aa)
C7M84_002625Notch protein. (1920 aa)
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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