(16 nodes) Phosphoprotein phosphatase activity, and Transcriptional regulatory protein WalR-like network (Vibrio harveyi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	AMF96365.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	AMF96407.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (1053 aa)
	AMF96767.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
	AMF97266.1	Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	AMF97389.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (1128 aa)
	arcB	Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology. (789 aa)
	AMF98349.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	AMF98945.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (806 aa)
	AMF99883.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
	AMG00463.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (878 aa)
	AMG00524.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
	AMG00651.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1218 aa)
	AMG00813.1	Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	AMG00953.1	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
	AMG01080.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (786 aa)
	AMG01452.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1200 aa)

Your Current Organism:

Vibrio harveyi

NCBI taxonomy Id: 669
Other names: ATCC 14126, Achromobacter harveyi, Beneckea harveyi, Beneckea neptuna, CAIM 513, CCUG 28584, CECT 525, CIP 103192, DSM 19623, IFO 15634, LMG 4044, LMG:4044, Lucibacterium harveyi, NBRC 15634, NCCB 80033, NCTC 12970, Photobacterium harveyi, Pseudomonas harveyi, V. harveyi, Vibrio carchariae, Vibrio sp. HENC-01, Vibrio sp. HENC-02, Vibrio sp. PG 001, Vibrio sp. PG 002, Vibrio sp. PG 006, Vibrio sp. PG 007, Vibrio trachuri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMF96365.1	AMF96407.1	AL538_00795	AL538_01015	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AMF96365.1	AMF96767.1	AL538_00795	AL538_02980	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
AMF96365.1	AMF97266.1	AL538_00795	AL538_05630	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
AMF96365.1	AMF97389.1	AL538_00795	AL538_06295	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
AMF96365.1	AMF98349.1	AL538_00795	AL538_11790	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
AMF96365.1	AMF98945.1	AL538_00795	AL538_15080	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AMF96365.1	AMF99883.1	AL538_00795	AL538_19375	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
AMF96365.1	AMG00463.1	AL538_00795	AL538_22535	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
AMF96365.1	AMG00524.1	AL538_00795	AL538_22865	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
AMF96365.1	AMG00651.1	AL538_00795	AL538_23535	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AMF96365.1	AMG00813.1	AL538_00795	AL538_24370	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AMF96365.1	AMG00953.1	AL538_00795	AL538_25155	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AMF96365.1	AMG01080.1	AL538_00795	AL538_25830	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AMF96365.1	AMG01452.1	AL538_00795	AL538_25840	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AMF96365.1	arcB	AL538_00795	AL538_11780	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AMF96407.1	AMF96365.1	AL538_01015	AL538_00795	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AMF96407.1	AMF96767.1	AL538_01015	AL538_02980	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
AMF96407.1	AMF97266.1	AL538_01015	AL538_05630	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
AMF96407.1	AMF97389.1	AL538_01015	AL538_06295	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AMF96407.1	AMF98349.1	AL538_01015	AL538_11790	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598

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