35 items (Trypanosoma theileri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TM35_000721050	Uncharacterized protein. (486 aa)
	TM35_000391780	U1-type domain-containing protein. (120 aa)
	TM35_000381200	Putative ATP-dependent RNA helicase. (959 aa)
	TM35_000381520	CPSF_A domain-containing protein. (1862 aa)
	TM35_000371870	Putative pre-mRNA branch site protein p14. (117 aa)
	TM35_000371730	PHD finger-like domain-containing protein 5A. (110 aa)
	TM35_000271050	Uncharacterized protein. (584 aa)
	TM35_000251880	WD domain-containing protein. (419 aa)
	TM35_000241570	Splicing factor 3B subunit 1. (1112 aa)
	TM35_000232470	Small nuclear ribonucleoprotein Sm D2. (111 aa)
	TM35_000221210	PRP1_N domain-containing protein. (1080 aa)
	TM35_000212180	Putative RNA-binding protein. (161 aa)
	TM35_000231510	Small nuclear ribonucleoprotein. (105 aa)
	TM35_000201670	Putative ATP-dependent RNA helicase. (2336 aa)
	TM35_000211250	RNA-binding protein. (182 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (113 aa)
	TM35_000132300	Spliceosomal U5 snRNP-specific protein. (168 aa)
	TM35_000122980	Putative U4/U6 small nuclear ribonuclear protein. (652 aa)
	TM35_000111820	U6 snRNA-associated Sm-like protein LSm8. (130 aa)
	TM35_000101120	U1 small nuclear ribonucleoprotein. (273 aa)
	TM35_000091340	Smad nuclear-interacting protein 1. (274 aa)
	TM35_000091420	RNA-binding protein. (263 aa)
	TM35_000091960	U2 small nuclear ribonucleoprotein B. (114 aa)
	TM35_000101080	Nop domain-containing protein. (239 aa)
	TM35_000082540	Trans-splicing factor. (356 aa)
	TM35_000073180	Splicing factor 3A. (541 aa)
	TM35_000074480	Putative spliceosome-associated protein. (462 aa)
	TM35_000074510	Nuclear cap-binding protein subunit 2. (187 aa)
	TM35_000061990	Uncharacterized protein. (560 aa)
	TM35_000051480	Uncharacterized protein. (625 aa)
	TM35_000033190	Putative U2 small nuclear ribonucleoprotein 40K. (347 aa)
	TM35_000024480	Putative ATP-dependent DEAD/H RNA helicase. (885 aa)
	TM35_000024830	Putative small nuclear ribonucleoprotein. (131 aa)
	TM35_000015440	Uncharacterized protein. (500 aa)
	TM35_000016720	Small nuclear ribonucleoprotein Sm D3. (115 aa)

Your Current Organism:

Trypanosoma theileri

NCBI taxonomy Id: 67003
Other names: T. theileri

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	TM35_000015440	A0A1X0NUP3	A0A1X0P9Q5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.579
LSM4	TM35_000016720	A0A1X0NUP3	A0A1X0PAE8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.958
LSM4	TM35_000024830	A0A1X0NUP3	A0A1X0P880	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative small nuclear ribonucleoprotein.	0.933
LSM4	TM35_000033190	A0A1X0NUP3	A0A1X0P6L0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative U2 small nuclear ribonucleoprotein 40K.	0.767
LSM4	TM35_000051480	A0A1X0NUP3	A0A1X0P3Q4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.744
LSM4	TM35_000061990	A0A1X0NUP3	A0A1X0P2M3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.996
LSM4	TM35_000073180	A0A1X0NUP3	A0A1X0P1R3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Splicing factor 3A.	0.958
LSM4	TM35_000074480	A0A1X0NUP3	A0A1X0P248	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative spliceosome-associated protein.	0.881
LSM4	TM35_000074510	A0A1X0NUP3	A0A1X0P277	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nuclear cap-binding protein subunit 2.	0.816
LSM4	TM35_000082540	A0A1X0NUP3	A0A1X0P0H6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Trans-splicing factor.	0.877
LSM4	TM35_000091340	A0A1X0NUP3	A0A1X0NZG4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Smad nuclear-interacting protein 1.	0.904
LSM4	TM35_000091420	A0A1X0NUP3	A0A1X0NZI1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA-binding protein.	0.744
LSM4	TM35_000091960	A0A1X0NUP3	A0A1X0NZM5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U2 small nuclear ribonucleoprotein B.	0.901
LSM4	TM35_000101080	A0A1X0NUP3	A0A1X0P0A6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.877
LSM4	TM35_000101120	A0A1X0NUP3	A0A1X0NYS6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U1 small nuclear ribonucleoprotein.	0.821
LSM4	TM35_000111820	A0A1X0NUP3	A0A1X0NYL8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8.	0.999
LSM4	TM35_000122980	A0A1X0NUP3	A0A1X0NYH8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative U4/U6 small nuclear ribonuclear protein.	0.820
LSM4	TM35_000132300	A0A1X0NUP3	A0A1X0NWY8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosomal U5 snRNP-specific protein.	0.953
LSM4	TM35_000201670	A0A1X0NUP3	A0A1X0NT92	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative ATP-dependent RNA helicase.	0.862
LSM4	TM35_000211250	A0A1X0NUP3	A0A1X0NTL2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA-binding protein.	0.744