6 items (Trypanosoma theileri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TM35_000042800	PRP8 protein. (2396 aa)
	TM35_000082540	Trans-splicing factor. (356 aa)
	TM35_000101080	Nop domain-containing protein. (239 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (113 aa)
	TM35_000221210	PRP1_N domain-containing protein. (1080 aa)
	TM35_000232470	Small nuclear ribonucleoprotein Sm D2. (111 aa)

Your Current Organism:

Trypanosoma theileri

NCBI taxonomy Id: 67003
Other names: T. theileri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	TM35_000042800	A0A1X0NUP3	A0A1X0P548	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP8 protein.	0.980
LSM4	TM35_000082540	A0A1X0NUP3	A0A1X0P0H6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Trans-splicing factor.	0.877
LSM4	TM35_000101080	A0A1X0NUP3	A0A1X0P0A6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.877
LSM4	TM35_000221210	A0A1X0NUP3	A0A1X0NRI9	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP1_N domain-containing protein.	0.981
LSM4	TM35_000232470	A0A1X0NUP3	A0A1X0NRD5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.997
TM35_000042800	LSM4	A0A1X0P548	A0A1X0NUP3	PRP8 protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.980
TM35_000042800	TM35_000082540	A0A1X0P548	A0A1X0P0H6	PRP8 protein.	Trans-splicing factor.	0.909
TM35_000042800	TM35_000101080	A0A1X0P548	A0A1X0P0A6	PRP8 protein.	Nop domain-containing protein.	0.909
TM35_000042800	TM35_000221210	A0A1X0P548	A0A1X0NRI9	PRP8 protein.	PRP1_N domain-containing protein.	0.999
TM35_000042800	TM35_000232470	A0A1X0P548	A0A1X0NRD5	PRP8 protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
TM35_000082540	LSM4	A0A1X0P0H6	A0A1X0NUP3	Trans-splicing factor.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.877
TM35_000082540	TM35_000042800	A0A1X0P0H6	A0A1X0P548	Trans-splicing factor.	PRP8 protein.	0.909
TM35_000082540	TM35_000221210	A0A1X0P0H6	A0A1X0NRI9	Trans-splicing factor.	PRP1_N domain-containing protein.	0.919
TM35_000082540	TM35_000232470	A0A1X0P0H6	A0A1X0NRD5	Trans-splicing factor.	Small nuclear ribonucleoprotein Sm D2.	0.855
TM35_000101080	LSM4	A0A1X0P0A6	A0A1X0NUP3	Nop domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.877
TM35_000101080	TM35_000042800	A0A1X0P0A6	A0A1X0P548	Nop domain-containing protein.	PRP8 protein.	0.909
TM35_000101080	TM35_000221210	A0A1X0P0A6	A0A1X0NRI9	Nop domain-containing protein.	PRP1_N domain-containing protein.	0.919
TM35_000101080	TM35_000232470	A0A1X0P0A6	A0A1X0NRD5	Nop domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.855
TM35_000221210	LSM4	A0A1X0NRI9	A0A1X0NUP3	PRP1_N domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.981
TM35_000221210	TM35_000042800	A0A1X0NRI9	A0A1X0P548	PRP1_N domain-containing protein.	PRP8 protein.	0.999