36 items (Trypanosoma theileri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TM35_000152970	Uncharacterized protein. (959 aa)
	TM35_000172910	RIC1 domain-containing protein. (1276 aa)
	TM35_000121610	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (963 aa)
	TM35_000111600	Uncharacterized protein. (129 aa)
	TM35_000121450	Vps51/Vps67 protein. (852 aa)
	TM35_000072590	Uncharacterized protein. (317 aa)
	TM35_000074780	Rhodanese domain-containing protein. (766 aa)
	TM35_000064190	Putative SNF7-like protein. (214 aa)
	TM35_000063360	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (216 aa)
	TM35_000064170	Vacuolar protein sorting-associated protein-like. (342 aa)
	TM35_000053330	Vacuolar protein sorting protein 16. (1007 aa)
	TM35_000064740	Uncharacterized protein. (227 aa)
	TM35_000042150	FPL domain-containing protein. (870 aa)
	TM35_000042320	Charged multivesicular body protein 1. (206 aa)
	TM35_000053360	Charged multivesicular body protein 2A. (217 aa)
	TM35_000031990	Vps53-like domain protein. (911 aa)
	TM35_000032100	GLUE N-terminal domain-containing protein. (450 aa)
	TM35_000032570	Sarcoplasmic reticulum glycoprotein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (548 aa)
	TM35_000034550	Putative vacuolar protein sorting complex subunit; Belongs to the VPS16 family. (923 aa)
	TM35_000035110	Putative to be involved in ER-Golgi transport. (142 aa)
	TM35_000025130	Putative dolicholphosphate-mannose synthase. (235 aa)
	TM35_000013150	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (447 aa)
	TM35_000014350	ESCRT-II complex subunit VPS22. (352 aa)
	TM35_000014950	Sarcoplasmic reticulum glycoprotein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (555 aa)
	TM35_000016130	Putative vacuolar transport protein 4A; Belongs to the AAA ATPase family. (473 aa)
	TM35_000015420	Putative leucine-rich repeat protein. (830 aa)
	TM35_000191450	Uncharacterized protein. (636 aa)
	TM35_000171490	UPF0505 protein C16orf62. (1017 aa)
	TM35_000172590	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (191 aa)
	TM35_000421410	Putative SNF-7-like protein. (220 aa)
	TM35_000381360	Uncharacterized protein. (378 aa)
	TM35_000342020	Vps54 domain-containing protein. (1118 aa)
	TM35_000332060	Putative GCN5-like protein. (235 aa)
	TM35_000231320	Putative ras-related protein rab-14. (213 aa)
	TM35_000212600	Vacuolar protein sorting protein. (919 aa)
	TM35_000151670	Uncharacterized protein. (1269 aa)

Your Current Organism:

Trypanosoma theileri

NCBI taxonomy Id: 67003
Other names: T. theileri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TM35_000013150	TM35_000016130	A0A1X0P983	A0A1X0P9Z1	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Putative vacuolar transport protein 4A; Belongs to the AAA ATPase family.	0.807
TM35_000013150	TM35_000025130	A0A1X0P983	A0A1X0P8B3	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Putative dolicholphosphate-mannose synthase.	0.405
TM35_000013150	TM35_000032100	A0A1X0P983	A0A1X0P698	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	GLUE N-terminal domain-containing protein.	0.420
TM35_000013150	TM35_000042320	A0A1X0P983	A0A1X0P5A2	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Charged multivesicular body protein 1.	0.974
TM35_000013150	TM35_000053360	A0A1X0P983	A0A1X0P5N6	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Charged multivesicular body protein 2A.	0.958
TM35_000013150	TM35_000063360	A0A1X0P983	A0A1X0P3A4	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.550
TM35_000013150	TM35_000064190	A0A1X0P983	A0A1X0P3A0	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Putative SNF7-like protein.	0.870
TM35_000013150	TM35_000064740	A0A1X0P983	A0A1X0P4I7	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.959
TM35_000013150	TM35_000381360	A0A1X0P983	A0A1X0NKE3	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.977
TM35_000013150	TM35_000421410	A0A1X0P983	A0A1X0NJR2	Putative vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	Putative SNF-7-like protein.	0.904
TM35_000014350	TM35_000025130	A0A1X0P9K2	A0A1X0P8B3	ESCRT-II complex subunit VPS22.	Putative dolicholphosphate-mannose synthase.	0.999
TM35_000014350	TM35_000032100	A0A1X0P9K2	A0A1X0P698	ESCRT-II complex subunit VPS22.	GLUE N-terminal domain-containing protein.	0.999
TM35_000014350	TM35_000042320	A0A1X0P9K2	A0A1X0P5A2	ESCRT-II complex subunit VPS22.	Charged multivesicular body protein 1.	0.544
TM35_000014350	TM35_000053360	A0A1X0P9K2	A0A1X0P5N6	ESCRT-II complex subunit VPS22.	Charged multivesicular body protein 2A.	0.927
TM35_000014350	TM35_000063360	A0A1X0P9K2	A0A1X0P3A4	ESCRT-II complex subunit VPS22.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.948
TM35_000014350	TM35_000064190	A0A1X0P9K2	A0A1X0P3A0	ESCRT-II complex subunit VPS22.	Putative SNF7-like protein.	0.899
TM35_000014350	TM35_000064740	A0A1X0P9K2	A0A1X0P4I7	ESCRT-II complex subunit VPS22.	Uncharacterized protein.	0.968
TM35_000014350	TM35_000381360	A0A1X0P9K2	A0A1X0NKE3	ESCRT-II complex subunit VPS22.	Uncharacterized protein.	0.507
TM35_000015420	TM35_000031990	A0A1X0PA29	A0A1X0P670	Putative leucine-rich repeat protein.	Vps53-like domain protein.	0.954
TM35_000015420	TM35_000121450	A0A1X0PA29	A0A1X0NYZ3	Putative leucine-rich repeat protein.	Vps51/Vps67 protein.	0.940