59 items (Trypanosoma theileri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TM35_000341070	Putative eukaryotic translation initiation factor 3 subunit 8. (719 aa)
	TM35_000016310	RuvB-like helicase; Belongs to the RuvB family. (459 aa)
	TM35_000012760	Ribosomal protein S19. (164 aa)
	TM35_000011370	Eukaryotic translation initiation factor 5. (388 aa)
	TM35_000015550	Ribosomal protein S19. (167 aa)
	TM35_000025200	Eukaryotic translation initiation factor 3 subunit L. (492 aa)
	TM35_000032810	Putative ribosome biogenesis protein. (300 aa)
	TM35_000045350	60S ribosomal protein L5. (307 aa)
	TM35_000044420	Uncharacterized protein. (349 aa)
	TM35_000042800	PRP8 protein. (2396 aa)
	TM35_000053290	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (323 aa)
	TM35_000042060	Chaperone protein DnaJ. (491 aa)
	TM35_000054280	Small GTP-binding protein. (378 aa)
	TM35_000054220	Rbd-Unit. (209 aa)
	TM35_000053300	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (323 aa)
	TM35_000064760	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (342 aa)
	TM35_000061780	Protein kinase domain-containing protein. (928 aa)
	TM35_000063910	Parafibromin. (380 aa)
	TM35_000071800	Eukaryotic translation initiation factor 3 subunit 7-like protein; Belongs to the eIF-3 subunit D family. (508 aa)
	TM35_000071190	Serine/arginine-rich protein specific kinase SRPK. (727 aa)
	TM35_000083260	Putative 60S ribosomal protein L6. (196 aa)
	TM35_000082540	Trans-splicing factor. (356 aa)
	TM35_000211920	Protein kinase domain-containing protein. (934 aa)
	TM35_000211070	Brix domain-containing protein. (388 aa)
	TM35_000222700	Protein SHQ1. (550 aa)
	TM35_000221210	PRP1_N domain-containing protein. (1080 aa)
	TM35_000232470	Small nuclear ribonucleoprotein Sm D2. (111 aa)
	TM35_000241570	Splicing factor 3B subunit 1. (1112 aa)
	TM35_000241850	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (407 aa)
	TM35_000281790	Translation initiation factor. (380 aa)
	TM35_000312320	Putative RNA-binding protein 5. (222 aa)
	TM35_000351340	Putative 60S ribosomal protein L10. (213 aa)
	TM35_000082000	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (227 aa)
	TM35_000081600	Uncharacterized protein. (784 aa)
	TM35_000101080	Nop domain-containing protein. (239 aa)
	TM35_000361400	Putative 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (156 aa)
	TM35_000361390	Putative 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (163 aa)
	TM35_000017240	Putative RNA-binding protein. (388 aa)
	TM35_000371260	Pre-mRNA-splicing factor ISY1. (260 aa)
	TM35_000391780	U1-type domain-containing protein. (120 aa)
	TM35_000391060	Uncharacterized protein. (417 aa)
	TM35_000063300	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (245 aa)
	TM35_000202600	Uncharacterized protein. (760 aa)
	TM35_000191790	Translation initiation factor 2D. (656 aa)
	TM35_000201670	Putative ATP-dependent RNA helicase. (2336 aa)
	TM35_000191380	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (152 aa)
	TM35_000171190	Translation initiation factor 3 subunit K. (203 aa)
	TM35_000212660	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (292 aa)
	TM35_000201290	Putative translation initiation factor. (690 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (113 aa)
	TM35_000161450	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (190 aa)
	TM35_000162440	Cytoplasmic translation machinery associated protein. (196 aa)
	TM35_000092380	Uncharacterized protein. (393 aa)
	TM35_000162980	Uncharacterized protein. (588 aa)
	TM35_000131050	Pre-mRNA-splicing factor SYF1. (778 aa)
	TM35_000182260	Putative 60S ribosomal protein L6. (187 aa)
	TM35_000191870	Prp18 domain-containing protein. (425 aa)
	TM35_000015460	RNA-binding protein. (269 aa)
	TM35_000015360	RuvB-like helicase; Belongs to the RuvB family. (475 aa)

Your Current Organism:

Trypanosoma theileri

NCBI taxonomy Id: 67003
Other names: T. theileri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	TM35_000042060	A0A1X0NUP3	A0A1X0P4Z0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Chaperone protein DnaJ.	0.862
LSM4	TM35_000042800	A0A1X0NUP3	A0A1X0P548	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP8 protein.	0.980
LSM4	TM35_000082540	A0A1X0NUP3	A0A1X0P0H6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Trans-splicing factor.	0.877
LSM4	TM35_000101080	A0A1X0NUP3	A0A1X0P0A6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.877
LSM4	TM35_000201670	A0A1X0NUP3	A0A1X0NT92	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative ATP-dependent RNA helicase.	0.862
LSM4	TM35_000221210	A0A1X0NUP3	A0A1X0NRI9	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP1_N domain-containing protein.	0.981
LSM4	TM35_000232470	A0A1X0NUP3	A0A1X0NRD5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.997
LSM4	TM35_000241570	A0A1X0NUP3	A0A1X0NQN8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Splicing factor 3B subunit 1.	0.944
LSM4	TM35_000371260	A0A1X0NUP3	A0A1X0NL28	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing factor ISY1.	0.464
LSM4	TM35_000391780	A0A1X0NUP3	A0A1X0NJQ6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U1-type domain-containing protein.	0.952
TM35_000011370	TM35_000012760	A0A1X0P9X7	A0A1X0P9X9	Eukaryotic translation initiation factor 5.	Ribosomal protein S19.	0.905
TM35_000011370	TM35_000015460	A0A1X0P9X7	A0A1X0PAQ4	Eukaryotic translation initiation factor 5.	RNA-binding protein.	0.996
TM35_000011370	TM35_000015550	A0A1X0P9X7	A0A1X0P9W6	Eukaryotic translation initiation factor 5.	Ribosomal protein S19.	0.905
TM35_000011370	TM35_000025200	A0A1X0P9X7	A0A1X0P8D7	Eukaryotic translation initiation factor 5.	Eukaryotic translation initiation factor 3 subunit L.	0.931
TM35_000011370	TM35_000063300	A0A1X0P9X7	A0A1X0NEL3	Eukaryotic translation initiation factor 5.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.977
TM35_000011370	TM35_000064760	A0A1X0P9X7	A0A1X0P3N7	Eukaryotic translation initiation factor 5.	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.997
TM35_000011370	TM35_000071800	A0A1X0P9X7	A0A1X0P1D0	Eukaryotic translation initiation factor 5.	Eukaryotic translation initiation factor 3 subunit 7-like protein; Belongs to the eIF-3 subunit D family.	0.971
TM35_000011370	TM35_000161450	A0A1X0P9X7	A0A1X0NUX5	Eukaryotic translation initiation factor 5.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.985
TM35_000011370	TM35_000171190	A0A1X0P9X7	A0A1X0NU56	Eukaryotic translation initiation factor 5.	Translation initiation factor 3 subunit K.	0.961
TM35_000011370	TM35_000191380	A0A1X0P9X7	A0A1X0NT57	Eukaryotic translation initiation factor 5.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.986