STRINGSTRING
AGK56559.1 AGK56559.1 AGK56560.1 AGK56560.1 AGK58875.1 AGK58875.1 gloB gloB AGK59192.1 AGK59192.1 AGK59704.1 AGK59704.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGK56559.1DNA-binding transcriptional repressor; COG1278 Cold shock proteins. (68 aa)
AGK56560.1Peptidase M15A; COG3108 Uncharacterized protein conserved in bacteria. (136 aa)
AGK58875.1Beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases. (220 aa)
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (269 aa)
AGK59192.1Hypothetical protein. (144 aa)
AGK59704.1Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases. (131 aa)
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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