28 items (Heterostelium album) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mcfQ	Transmembrane protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (334 aa)
	exoc6	Exocyst complex subunit 6; Belongs to the mitochondrial carrier (TC 2.A.29) family. (877 aa)
	PPL_03400	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family. (292 aa)
	mcfD	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (327 aa)
	mcfB	EF-hand domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (419 aa)
	ancA	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	PPL_02316	Galactose transporter. (375 aa)
	PPL_01534	Uncharacterized protein. (317 aa)
	PPL_00839	SRR1 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (604 aa)
	mcfO	EF-hand domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (719 aa)
	ctns	Cystinosin. (271 aa)
	mcfM	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (327 aa)
	PPL_10073	Uncharacterized protein. (384 aa)
	PPL_10399	Uncharacterized protein. (330 aa)
	mcfC	EF-hand domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (487 aa)
	PPL_10681	Aa_trans domain-containing protein. (282 aa)
	mcfY	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (346 aa)
	PPL_00027	Putative acetyl-CoA transporter. (571 aa)
	abcC8	ABC transporter C family protein; Belongs to the histidine acid phosphatase family. (1847 aa)
	PPL_05108	Uncharacterized protein. (364 aa)
	ucpB	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (204 aa)
	mcfZ	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (299 aa)
	PPL_07378	Uncharacterized protein. (295 aa)
	mcfI	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (310 aa)
	PPL_08893	ABC transporter domain-containing protein. (123 aa)
	PPL_09218	Transmembrane protein. (198 aa)
	PPL_09577	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (109 aa)
	PPL_09579	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (474 aa)

Your Current Organism:

Heterostelium album

NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PPL_00839	mcfZ	D3AXK8	D3BEF7	SRR1 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
PPL_01534	PPL_05108	D3AZS1	D3B9G4	Uncharacterized protein.	Uncharacterized protein.	0.558
PPL_01534	PPL_10073	D3AZS1	D3BQ90	Uncharacterized protein.	Uncharacterized protein.	0.491
PPL_03400	mcfZ	D3B4S4	D3BEF7	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
PPL_05108	PPL_01534	D3B9G4	D3AZS1	Uncharacterized protein.	Uncharacterized protein.	0.558
PPL_09577	PPL_09579	D3BNQ6	D3BNQ8	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.974
PPL_09579	PPL_09577	D3BNQ8	D3BNQ6	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.974
PPL_10073	PPL_01534	D3BQ90	D3AZS1	Uncharacterized protein.	Uncharacterized protein.	0.491
ancA	mcfZ	D3B2T1	D3BEF7	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
exoc6	mcfZ	D3B4S5	D3BEF7	Exocyst complex subunit 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
mcfD	mcfY	D3B4B6	D3BTS7	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.408
mcfM	mcfZ	D3AVN2	D3BEF7	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.701
mcfY	mcfD	D3BTS7	D3B4B6	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.408
mcfZ	PPL_00839	D3BEF7	D3AXK8	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	SRR1 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
mcfZ	PPL_03400	D3BEF7	D3B4S4	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
mcfZ	ancA	D3BEF7	D3B2T1	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ADP/ATP translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
mcfZ	exoc6	D3BEF7	D3B4S5	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Exocyst complex subunit 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.606
mcfZ	mcfM	D3BEF7	D3AVN2	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.701
mcfZ	ucpB	D3BEF7	D3BDS7	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.443
ucpB	mcfZ	D3BDS7	D3BEF7	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.443