6 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7Q7I2_GLOTA	Uncharacterized protein. (995 aa)
	S7QGB8_GLOTA	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (243 aa)
	S7RBG3_GLOTA	Uncharacterized protein. (457 aa)
	S7RLR2_GLOTA	Phosphatidylserine decarboxylase. (337 aa)
	S7RRV4_GLOTA	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC). (204 aa)
	PSD1	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (509 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PSD1	S7Q7I2_GLOTA	S7S5U5	S7Q7I2	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Uncharacterized protein.	0.925
PSD1	S7QGB8_GLOTA	S7S5U5	S7QGB8	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.970
PSD1	S7RBG3_GLOTA	S7S5U5	S7RBG3	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Uncharacterized protein.	0.925
PSD1	S7RLR2_GLOTA	S7S5U5	S7RLR2	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Phosphatidylserine decarboxylase.	0.635
PSD1	S7RRV4_GLOTA	S7S5U5	S7RRV4	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).	0.959
S7Q7I2_GLOTA	PSD1	S7Q7I2	S7S5U5	Uncharacterized protein.	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	0.925
S7Q7I2_GLOTA	S7QGB8_GLOTA	S7Q7I2	S7QGB8	Uncharacterized protein.	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.851
S7Q7I2_GLOTA	S7RBG3_GLOTA	S7Q7I2	S7RBG3	Uncharacterized protein.	Uncharacterized protein.	0.901
S7Q7I2_GLOTA	S7RLR2_GLOTA	S7Q7I2	S7RLR2	Uncharacterized protein.	Phosphatidylserine decarboxylase.	0.911
S7Q7I2_GLOTA	S7RRV4_GLOTA	S7Q7I2	S7RRV4	Uncharacterized protein.	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).	0.950
S7QGB8_GLOTA	PSD1	S7QGB8	S7S5U5	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	0.970
S7QGB8_GLOTA	S7Q7I2_GLOTA	S7QGB8	S7Q7I2	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Uncharacterized protein.	0.851
S7QGB8_GLOTA	S7RBG3_GLOTA	S7QGB8	S7RBG3	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Uncharacterized protein.	0.851
S7QGB8_GLOTA	S7RLR2_GLOTA	S7QGB8	S7RLR2	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Phosphatidylserine decarboxylase.	0.941
S7QGB8_GLOTA	S7RRV4_GLOTA	S7QGB8	S7RRV4	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).	0.926
S7RBG3_GLOTA	PSD1	S7RBG3	S7S5U5	Uncharacterized protein.	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	0.925
S7RBG3_GLOTA	S7Q7I2_GLOTA	S7RBG3	S7Q7I2	Uncharacterized protein.	Uncharacterized protein.	0.901
S7RBG3_GLOTA	S7QGB8_GLOTA	S7RBG3	S7QGB8	Uncharacterized protein.	Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.851
S7RBG3_GLOTA	S7RLR2_GLOTA	S7RBG3	S7RLR2	Uncharacterized protein.	Phosphatidylserine decarboxylase.	0.911
S7RBG3_GLOTA	S7RRV4_GLOTA	S7RBG3	S7RRV4	Uncharacterized protein.	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).	0.950