(66 nodes) SNARE complex network (Gloeophyllum trabeum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7PSC4_GLOTA	F-box domain-containing protein. (646 aa)
	S7PTD8_GLOTA	Uncharacterized protein. (664 aa)
	S7PTE3_GLOTA	Uncharacterized protein. (129 aa)
	S7PTE7_GLOTA	F-box domain-containing protein. (664 aa)
	S7PTN4_GLOTA	Uncharacterized protein. (1062 aa)
	S7PUR6_GLOTA	Uncharacterized protein. (473 aa)
	S7PUZ5_GLOTA	Uncharacterized protein. (393 aa)
	S7PVR7_GLOTA	Uncharacterized protein. (385 aa)
	S7PW50_GLOTA	FAD-binding FR-type domain-containing protein. (604 aa)
	S7PWX0_GLOTA	F-box domain-containing protein. (519 aa)
	S7PZZ9_GLOTA	Uncharacterized protein. (258 aa)
	S7Q0K0_GLOTA	Uncharacterized protein. (203 aa)
	S7Q0X7_GLOTA	Uncharacterized protein. (619 aa)
	S7Q1L5_GLOTA	F-box domain-containing protein. (450 aa)
	S7Q649_GLOTA	F-box domain-containing protein. (606 aa)
	S7Q721_GLOTA	F-box domain-containing protein. (564 aa)
	S7Q7T3_GLOTA	F-box domain-containing protein. (696 aa)
	S7Q863_GLOTA	Uncharacterized protein. (521 aa)
	S7Q879_GLOTA	F-box domain-containing protein. (572 aa)
	S7Q8U0_GLOTA	F-box domain-containing protein. (605 aa)
	S7Q9W4_GLOTA	F-box domain-containing protein. (528 aa)
	S7QAJ5_GLOTA	Uncharacterized protein. (485 aa)
	S7QB47_GLOTA	Uncharacterized protein. (404 aa)
	S7QCH0_GLOTA	Uncharacterized protein. (517 aa)
	S7QFP1_GLOTA	Tetraspanin Pls1 family. (230 aa)
	S7QJT8_GLOTA	Uncharacterized protein. (409 aa)
	S7QKZ8_GLOTA	F-box domain-containing protein. (552 aa)
	S7QL04_GLOTA	F-box domain-containing protein. (545 aa)
	S7QLG1_GLOTA	F-box domain-containing protein. (500 aa)
	S7QLG6_GLOTA	F-box domain-containing protein. (464 aa)
	S7QLH9_GLOTA	F-box domain-containing protein. (549 aa)
	S7QPJ2_GLOTA	F-box domain-containing protein. (740 aa)
	S7R5Q5_GLOTA	F-box domain-containing protein. (291 aa)
	S7R7U3_GLOTA	Uncharacterized protein. (282 aa)
	S7R9B1_GLOTA	F-box domain-containing protein. (554 aa)
	S7RA57_GLOTA	Uncharacterized protein. (241 aa)
	S7RA60_GLOTA	F-box domain-containing protein. (520 aa)
	S7RA64_GLOTA	Uncharacterized protein. (237 aa)
	S7RBC2_GLOTA	Uncharacterized protein. (114 aa)
	S7RBR2_GLOTA	Uncharacterized protein. (103 aa)
	S7RCC7_GLOTA	F-box domain-containing protein. (469 aa)
	S7RCD7_GLOTA	Uncharacterized protein. (794 aa)
	S7RCX6_GLOTA	Uncharacterized protein. (487 aa)
	S7RCY2_GLOTA	Uncharacterized protein. (467 aa)
	S7RCY6_GLOTA	F-box domain-containing protein. (431 aa)
	S7RCZ2_GLOTA	Uncharacterized protein. (414 aa)
	S7RE14_GLOTA	Uncharacterized protein. (376 aa)
	S7RF67_GLOTA	F-box domain-containing protein. (467 aa)
	S7RH04_GLOTA	Uncharacterized protein. (107 aa)
	S7RIL4_GLOTA	Uncharacterized protein. (581 aa)
	S7RIN3_GLOTA	Uncharacterized protein. (506 aa)
	S7RIN7_GLOTA	Uncharacterized protein. (492 aa)
	S7RIP3_GLOTA	Uncharacterized protein. (493 aa)
	S7RJZ2_GLOTA	F-box domain-containing protein. (463 aa)
	S7RL70_GLOTA	Uncharacterized protein. (379 aa)
	S7RP57_GLOTA	Uncharacterized protein. (430 aa)
	S7RPR5_GLOTA	F-box domain-containing protein. (519 aa)
	S7RRF4_GLOTA	Uncharacterized protein. (492 aa)
	S7RRJ3_GLOTA	F-box domain-containing protein. (626 aa)
	S7RSV7_GLOTA	MYND-type domain-containing protein. (600 aa)
	S7RXD2_GLOTA	Phytocyanin domain-containing protein. (99 aa)
	S7RYS3_GLOTA	F-box domain-containing protein. (515 aa)
	S7S2I9_GLOTA	F-box domain-containing protein. (148 aa)
	S7S2T5_GLOTA	Uncharacterized protein. (523 aa)
	S7S509_GLOTA	Uncharacterized protein. (412 aa)
	S7S5A3_GLOTA	Uncharacterized protein. (298 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7Q863_GLOTA	S7RXD2_GLOTA	S7Q863	S7RXD2	Uncharacterized protein.	Phytocyanin domain-containing protein.	0.428
S7QFP1_GLOTA	S7S509_GLOTA	S7QFP1	S7S509	Tetraspanin Pls1 family.	Uncharacterized protein.	0.405
S7QFP1_GLOTA	S7S5A3_GLOTA	S7QFP1	S7S5A3	Tetraspanin Pls1 family.	Uncharacterized protein.	0.401
S7RXD2_GLOTA	S7Q863_GLOTA	S7RXD2	S7Q863	Phytocyanin domain-containing protein.	Uncharacterized protein.	0.428
S7RXD2_GLOTA	S7S509_GLOTA	S7RXD2	S7S509	Phytocyanin domain-containing protein.	Uncharacterized protein.	0.428
S7RXD2_GLOTA	S7S5A3_GLOTA	S7RXD2	S7S5A3	Phytocyanin domain-containing protein.	Uncharacterized protein.	0.448
S7S509_GLOTA	S7QFP1_GLOTA	S7S509	S7QFP1	Uncharacterized protein.	Tetraspanin Pls1 family.	0.405
S7S509_GLOTA	S7RXD2_GLOTA	S7S509	S7RXD2	Uncharacterized protein.	Phytocyanin domain-containing protein.	0.428
S7S5A3_GLOTA	S7QFP1_GLOTA	S7S5A3	S7QFP1	Uncharacterized protein.	Tetraspanin Pls1 family.	0.401
S7S5A3_GLOTA	S7RXD2_GLOTA	S7S5A3	S7RXD2	Uncharacterized protein.	Phytocyanin domain-containing protein.	0.448