(27 nodes) Mixed, incl. PPR repeat, and Outer kinetochore network (Gloeophyllum trabeum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7PU00_GLOTA	Uncharacterized protein. (263 aa)
	S7PWF2_GLOTA	Uncharacterized protein. (171 aa)
	S7PXX8_GLOTA	Mitochondrial glyco protein. (270 aa)
	S7PZL9_GLOTA	Uncharacterized protein. (71 aa)
	S7QAD6_GLOTA	Uncharacterized protein. (70 aa)
	S7QB04_GLOTA	Uncharacterized protein. (72 aa)
	S7QC90_GLOTA	Uncharacterized protein. (544 aa)
	S7QCW9_GLOTA	Uncharacterized protein. (298 aa)
	S7QEJ4_GLOTA	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (454 aa)
	S7QET6_GLOTA	Uncharacterized protein. (106 aa)
	S7QII7_GLOTA	Spindle pole body component. (872 aa)
	S7QIM7_GLOTA	Uncharacterized protein. (1168 aa)
	S7QIQ2_GLOTA	Spindle pole body component. (845 aa)
	S7QIQ4_GLOTA	Uncharacterized protein. (607 aa)
	S7QKG6_GLOTA	PPR_long domain-containing protein. (1415 aa)
	S7QL37_GLOTA	Uncharacterized protein. (686 aa)
	S7QMV6_GLOTA	Uncharacterized protein. (838 aa)
	S7RBH9_GLOTA	Spindle pole body component. (828 aa)
	S7RPH1_GLOTA	Uncharacterized protein. (93 aa)
	S7RS21_GLOTA	Spindle pole body component. (987 aa)
	S7RS44_GLOTA	Uncharacterized protein. (773 aa)
	S7RSG4_GLOTA	Uncharacterized protein. (122 aa)
	S7RXJ4_GLOTA	Uncharacterized protein. (444 aa)
	S7RY91_GLOTA	zf-Mss51 domain-containing protein. (552 aa)
	S7S128_GLOTA	Clavaminate synthase-like protein. (367 aa)
	S7S433_GLOTA	Uncharacterized protein. (439 aa)
	S7S5W5_GLOTA	Uncharacterized protein. (585 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PU00_GLOTA	S7PWF2_GLOTA	S7PU00	S7PWF2	Uncharacterized protein.	Uncharacterized protein.	0.964
S7PU00_GLOTA	S7QAD6_GLOTA	S7PU00	S7QAD6	Uncharacterized protein.	Uncharacterized protein.	0.818
S7PU00_GLOTA	S7QCW9_GLOTA	S7PU00	S7QCW9	Uncharacterized protein.	Uncharacterized protein.	0.805
S7PU00_GLOTA	S7QET6_GLOTA	S7PU00	S7QET6	Uncharacterized protein.	Uncharacterized protein.	0.966
S7PU00_GLOTA	S7QIQ2_GLOTA	S7PU00	S7QIQ2	Uncharacterized protein.	Spindle pole body component.	0.729
S7PU00_GLOTA	S7QL37_GLOTA	S7PU00	S7QL37	Uncharacterized protein.	Uncharacterized protein.	0.927
S7PU00_GLOTA	S7RPH1_GLOTA	S7PU00	S7RPH1	Uncharacterized protein.	Uncharacterized protein.	0.795
S7PU00_GLOTA	S7RS21_GLOTA	S7PU00	S7RS21	Uncharacterized protein.	Spindle pole body component.	0.792
S7PWF2_GLOTA	S7PU00_GLOTA	S7PWF2	S7PU00	Uncharacterized protein.	Uncharacterized protein.	0.964
S7PWF2_GLOTA	S7QAD6_GLOTA	S7PWF2	S7QAD6	Uncharacterized protein.	Uncharacterized protein.	0.872
S7PWF2_GLOTA	S7QCW9_GLOTA	S7PWF2	S7QCW9	Uncharacterized protein.	Uncharacterized protein.	0.783
S7PWF2_GLOTA	S7QET6_GLOTA	S7PWF2	S7QET6	Uncharacterized protein.	Uncharacterized protein.	0.921
S7PWF2_GLOTA	S7QIQ2_GLOTA	S7PWF2	S7QIQ2	Uncharacterized protein.	Spindle pole body component.	0.676
S7PWF2_GLOTA	S7QL37_GLOTA	S7PWF2	S7QL37	Uncharacterized protein.	Uncharacterized protein.	0.826
S7PWF2_GLOTA	S7RPH1_GLOTA	S7PWF2	S7RPH1	Uncharacterized protein.	Uncharacterized protein.	0.661
S7PWF2_GLOTA	S7RS21_GLOTA	S7PWF2	S7RS21	Uncharacterized protein.	Spindle pole body component.	0.793
S7PXX8_GLOTA	S7S5W5_GLOTA	S7PXX8	S7S5W5	Mitochondrial glyco protein.	Uncharacterized protein.	0.651
S7PZL9_GLOTA	S7QEJ4_GLOTA	S7PZL9	S7QEJ4	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.428
S7PZL9_GLOTA	S7QII7_GLOTA	S7PZL9	S7QII7	Uncharacterized protein.	Spindle pole body component.	0.520
S7QAD6_GLOTA	S7PU00_GLOTA	S7QAD6	S7PU00	Uncharacterized protein.	Uncharacterized protein.	0.818