16 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	S7PY79_GLOTA	Uncharacterized protein. (376 aa)
	S7Q004_GLOTA	GH16 domain-containing protein. (376 aa)
	S7Q0D9_GLOTA	Endo-beta-glucanase. (318 aa)
	S7Q1N2_GLOTA	GH16 domain-containing protein. (385 aa)
	S7Q5T8_GLOTA	Endo-beta-glucanase. (317 aa)
	S7Q784_GLOTA	Uncharacterized protein. (161 aa)
	S7QHU7_GLOTA	Nuclear cap-binding protein subunit 2. (226 aa)
	S7RCX4_GLOTA	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (116 aa)
	S7RIV3_GLOTA	RNA-binding domain-containing protein. (391 aa)
	S7RPL6_GLOTA	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (459 aa)
	S7RPX4_GLOTA	Uncharacterized protein. (354 aa)
	S7RQX0_GLOTA	GH16 domain-containing protein. (324 aa)
	S7RR74_GLOTA	Laminarinase. (314 aa)
	S7RTH2_GLOTA	Laminarinase. (317 aa)
	S7RU96_GLOTA	Uncharacterized protein. (578 aa)
	S7S050_GLOTA	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (215 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PY79_GLOTA	S7QHU7_GLOTA	S7PY79	S7QHU7	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.487
S7PY79_GLOTA	S7RIV3_GLOTA	S7PY79	S7RIV3	Uncharacterized protein.	RNA-binding domain-containing protein.	0.566
S7Q004_GLOTA	S7QHU7_GLOTA	S7Q004	S7QHU7	GH16 domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.487
S7Q004_GLOTA	S7RIV3_GLOTA	S7Q004	S7RIV3	GH16 domain-containing protein.	RNA-binding domain-containing protein.	0.566
S7Q0D9_GLOTA	S7QHU7_GLOTA	S7Q0D9	S7QHU7	Endo-beta-glucanase.	Nuclear cap-binding protein subunit 2.	0.487
S7Q0D9_GLOTA	S7RIV3_GLOTA	S7Q0D9	S7RIV3	Endo-beta-glucanase.	RNA-binding domain-containing protein.	0.566
S7Q1N2_GLOTA	S7QHU7_GLOTA	S7Q1N2	S7QHU7	GH16 domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.487
S7Q1N2_GLOTA	S7RIV3_GLOTA	S7Q1N2	S7RIV3	GH16 domain-containing protein.	RNA-binding domain-containing protein.	0.566
S7Q5T8_GLOTA	S7QHU7_GLOTA	S7Q5T8	S7QHU7	Endo-beta-glucanase.	Nuclear cap-binding protein subunit 2.	0.487
S7Q5T8_GLOTA	S7RIV3_GLOTA	S7Q5T8	S7RIV3	Endo-beta-glucanase.	RNA-binding domain-containing protein.	0.566
S7Q784_GLOTA	S7QHU7_GLOTA	S7Q784	S7QHU7	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.665
S7Q784_GLOTA	S7RCX4_GLOTA	S7Q784	S7RCX4	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.671
S7Q784_GLOTA	S7RIV3_GLOTA	S7Q784	S7RIV3	Uncharacterized protein.	RNA-binding domain-containing protein.	0.941
S7Q784_GLOTA	S7S050_GLOTA	S7Q784	S7S050	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.940
S7QHU7_GLOTA	S7PY79_GLOTA	S7QHU7	S7PY79	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.487
S7QHU7_GLOTA	S7Q004_GLOTA	S7QHU7	S7Q004	Nuclear cap-binding protein subunit 2.	GH16 domain-containing protein.	0.487
S7QHU7_GLOTA	S7Q0D9_GLOTA	S7QHU7	S7Q0D9	Nuclear cap-binding protein subunit 2.	Endo-beta-glucanase.	0.487
S7QHU7_GLOTA	S7Q1N2_GLOTA	S7QHU7	S7Q1N2	Nuclear cap-binding protein subunit 2.	GH16 domain-containing protein.	0.487
S7QHU7_GLOTA	S7Q5T8_GLOTA	S7QHU7	S7Q5T8	Nuclear cap-binding protein subunit 2.	Endo-beta-glucanase.	0.487
S7QHU7_GLOTA	S7Q784_GLOTA	S7QHU7	S7Q784	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.665