6 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7S4D7_GLOTA	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family. (308 aa)
	S7QHU7_GLOTA	Nuclear cap-binding protein subunit 2. (226 aa)
	S7RZW3_GLOTA	Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (583 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (136 aa)
	S7QKB1_GLOTA	Uncharacterized protein. (877 aa)
	S7Q3P3_GLOTA	Scavenger mRNA decapping enzyme. (320 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	S7S4D7_GLOTA	S7QMZ3	S7S4D7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	0.565
S7QHU7_GLOTA	S7QKB1_GLOTA	S7QHU7	S7QKB1	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.999
S7QHU7_GLOTA	S7S4D7_GLOTA	S7QHU7	S7S4D7	Nuclear cap-binding protein subunit 2.	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	0.667
S7QKB1_GLOTA	S7QHU7_GLOTA	S7QKB1	S7QHU7	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.999
S7QKB1_GLOTA	S7S4D7_GLOTA	S7QKB1	S7S4D7	Uncharacterized protein.	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	0.854
S7S4D7_GLOTA	LSM1	S7S4D7	S7QMZ3	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.565
S7S4D7_GLOTA	S7QHU7_GLOTA	S7S4D7	S7QHU7	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.667
S7S4D7_GLOTA	S7QKB1_GLOTA	S7S4D7	S7QKB1	Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.854