13 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7RHH4_GLOTA	CPSF_A domain-containing protein. (1409 aa)
	S7QLI0_GLOTA	Fip1 domain-containing protein. (544 aa)
	S7QIB8_GLOTA	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (593 aa)
	S7QGX8_GLOTA	Cleavage and polyadenylation specificity factor subunit 2. (931 aa)
	S7RHQ0_GLOTA	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (331 aa)
	S7QCJ0_GLOTA	Uncharacterized protein. (833 aa)
	S7QAP5_GLOTA	Uncharacterized protein. (1165 aa)
	S7RZ12_GLOTA	WD40 repeat-like protein. (352 aa)
	S7RJE6_GLOTA	WD40 repeat-like protein. (256 aa)
	S7RT68_GLOTA	DWNN-domain-containing protein. (565 aa)
	S7PWI9_GLOTA	RRM domain-containing protein. (169 aa)
	S7Q0M8_GLOTA	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (204 aa)
	S7RWL0_GLOTA	Ssu72-like protein. (175 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PWI9_GLOTA	S7Q0M8_GLOTA	S7PWI9	S7Q0M8	RRM domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.842
S7PWI9_GLOTA	S7QAP5_GLOTA	S7PWI9	S7QAP5	RRM domain-containing protein.	Uncharacterized protein.	0.990
S7PWI9_GLOTA	S7QCJ0_GLOTA	S7PWI9	S7QCJ0	RRM domain-containing protein.	Uncharacterized protein.	0.990
S7PWI9_GLOTA	S7QGX8_GLOTA	S7PWI9	S7QGX8	RRM domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.989
S7PWI9_GLOTA	S7QIB8_GLOTA	S7PWI9	S7QIB8	RRM domain-containing protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.976
S7PWI9_GLOTA	S7QLI0_GLOTA	S7PWI9	S7QLI0	RRM domain-containing protein.	Fip1 domain-containing protein.	0.980
S7PWI9_GLOTA	S7RHH4_GLOTA	S7PWI9	S7RHH4	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.990
S7PWI9_GLOTA	S7RHQ0_GLOTA	S7PWI9	S7RHQ0	RRM domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.702
S7PWI9_GLOTA	S7RJE6_GLOTA	S7PWI9	S7RJE6	RRM domain-containing protein.	WD40 repeat-like protein.	0.931
S7PWI9_GLOTA	S7RT68_GLOTA	S7PWI9	S7RT68	RRM domain-containing protein.	DWNN-domain-containing protein.	0.920
S7PWI9_GLOTA	S7RWL0_GLOTA	S7PWI9	S7RWL0	RRM domain-containing protein.	Ssu72-like protein.	0.956
S7PWI9_GLOTA	S7RZ12_GLOTA	S7PWI9	S7RZ12	RRM domain-containing protein.	WD40 repeat-like protein.	0.976
S7Q0M8_GLOTA	S7PWI9_GLOTA	S7Q0M8	S7PWI9	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	RRM domain-containing protein.	0.842
S7Q0M8_GLOTA	S7QAP5_GLOTA	S7Q0M8	S7QAP5	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Uncharacterized protein.	0.836
S7Q0M8_GLOTA	S7QCJ0_GLOTA	S7Q0M8	S7QCJ0	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Uncharacterized protein.	0.832
S7Q0M8_GLOTA	S7QGX8_GLOTA	S7Q0M8	S7QGX8	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.890
S7Q0M8_GLOTA	S7QIB8_GLOTA	S7Q0M8	S7QIB8	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.798
S7Q0M8_GLOTA	S7QLI0_GLOTA	S7Q0M8	S7QLI0	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Fip1 domain-containing protein.	0.971
S7Q0M8_GLOTA	S7RHH4_GLOTA	S7Q0M8	S7RHH4	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	CPSF_A domain-containing protein.	0.819
S7Q0M8_GLOTA	S7RZ12_GLOTA	S7Q0M8	S7RZ12	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	WD40 repeat-like protein.	0.802