42 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7QKL5_GLOTA	Rsa3 domain-containing protein. (200 aa)
	S7QLQ1_GLOTA	Spindle pole body component. (878 aa)
	S7QMB9_GLOTA	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (876 aa)
	S7QMF1_GLOTA	Uncharacterized protein. (244 aa)
	S7QMK0_GLOTA	Uncharacterized protein. (464 aa)
	S7QMU0_GLOTA	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (762 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (625 aa)
	S7QNC8_GLOTA	Las1-domain-containing protein. (485 aa)
	S7QPF7_GLOTA	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (563 aa)
	S7R703_GLOTA	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (665 aa)
	S7RBA6_GLOTA	ARM repeat-containing protein. (587 aa)
	S7RJN2_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (242 aa)
	S7RM67_GLOTA	RNA helicase. (615 aa)
	S7RMQ8_GLOTA	Noc2-domain-containing protein. (703 aa)
	S7RMV9_GLOTA	AAA-domain-containing protein. (768 aa)
	S7RP33_GLOTA	AAA_5 domain-containing protein. (111 aa)
	S7RP37_GLOTA	VWFA domain-containing protein. (324 aa)
	S7RRJ0_GLOTA	TGF beta-inducible nuclear protein 1. (266 aa)
	S7RTH6_GLOTA	Uncharacterized protein. (532 aa)
	S7RU67_GLOTA	C2H2-type domain-containing protein. (129 aa)
	S7RVF2_GLOTA	ATP-dependent RNA helicase DBP10. (948 aa)
	S7RXA4_GLOTA	Brix-domain-containing protein. (266 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (463 aa)
	S7PZS3_GLOTA	CBF-domain-containing protein. (1107 aa)
	S7Q0A8_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (466 aa)
	S7Q0U2_GLOTA	FHA domain-containing protein. (716 aa)
	S7Q3I7_GLOTA	Uncharacterized protein. (417 aa)
	S7Q3J3_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (369 aa)
	S7Q4V7_GLOTA	Uncharacterized protein. (1309 aa)
	S7Q4W5_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (630 aa)
	S7Q4W9_GLOTA	Uncharacterized protein. (245 aa)
	S7Q4Z7_GLOTA	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (254 aa)
	S7Q5A4_GLOTA	Ebp2-domain-containing protein. (417 aa)
	S7QA27_GLOTA	Brix-domain-containing protein. (381 aa)
	S7QA46_GLOTA	Protein MAK16; Belongs to the MAK16 family. (322 aa)
	S7QDL8_GLOTA	C2H2-type domain-containing protein. (450 aa)
	S7QFY0_GLOTA	Brix-domain-containing protein. (437 aa)
	S7QG57_GLOTA	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (806 aa)
	S7QIN7_GLOTA	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (311 aa)
	S7QK01_GLOTA	Uncharacterized protein. (611 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (716 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	S7QK06	S7QMZ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	S7PZS3_GLOTA	S7QK06	S7PZS3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF-domain-containing protein.	0.932
ERB1	S7Q0A8_GLOTA	S7QK06	S7Q0A8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	P-loop containing nucleoside triphosphate hydrolase protein.	0.989
ERB1	S7Q4Z7_GLOTA	S7QK06	S7Q4Z7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.995
ERB1	S7Q5A4_GLOTA	S7QK06	S7Q5A4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ebp2-domain-containing protein.	0.995
ERB1	S7QA27_GLOTA	S7QK06	S7QA27	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain-containing protein.	0.964
ERB1	S7QA46_GLOTA	S7QK06	S7QA46	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.956
ERB1	S7QDL8_GLOTA	S7QK06	S7QDL8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	C2H2-type domain-containing protein.	0.493
ERB1	S7QFY0_GLOTA	S7QK06	S7QFY0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain-containing protein.	0.978
ERB1	S7QG57_GLOTA	S7QK06	S7QG57	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.993
ERB1	S7QIN7_GLOTA	S7QK06	S7QIN7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.707
ERB1	S7QK01_GLOTA	S7QK06	S7QK01	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.989
ERB1	S7QLQ1_GLOTA	S7QK06	S7QLQ1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Spindle pole body component.	0.991
ERB1	S7QMB9_GLOTA	S7QK06	S7QMB9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.972
ERB1	S7QMF1_GLOTA	S7QK06	S7QMF1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.817
ERB1	S7QMK0_GLOTA	S7QK06	S7QMK0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.874
ERB1	S7QMU0_GLOTA	S7QK06	S7QMU0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.949
ERB1	S7QNC8_GLOTA	S7QK06	S7QNC8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Las1-domain-containing protein.	0.760
ERB1	S7QPF7_GLOTA	S7QK06	S7QPF7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.911
ERB1	S7R703_GLOTA	S7QK06	S7R703	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.995