20 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7Q750_GLOTA	Uncharacterized protein. (576 aa)
	S7Q7C5_GLOTA	DRIM domain-containing protein. (1844 aa)
	S7Q8U9_GLOTA	TRAUB-domain-containing protein. (513 aa)
	S7QCA6_GLOTA	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	S7QKT7_GLOTA	WD40 repeat-like protein. (997 aa)
	S7QLQ7_GLOTA	Small-subunit processome. (332 aa)
	S7QNE7_GLOTA	NUC189-domain-containing protein. (785 aa)
	S7QPR9_GLOTA	Uncharacterized protein. (1479 aa)
	S7REW6_GLOTA	Sas10 domain-containing protein. (672 aa)
	S7RHD5_GLOTA	WD40 repeat-like protein. (583 aa)
	S7RJI9_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (1379 aa)
	S7S1R9_GLOTA	Uncharacterized protein. (1017 aa)
	S7RQP6_GLOTA	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (561 aa)
	S7S1R3_GLOTA	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (393 aa)
	S7S0H6_GLOTA	Fcf1-domain-containing protein. (279 aa)
	S7PVH5_GLOTA	BING4CT-domain-containing protein. (616 aa)
	S7PW56_GLOTA	WD40 repeat-like protein. (446 aa)
	S7PW71_GLOTA	RNA helicase. (733 aa)
	S7Q4W8_GLOTA	Fcf1-domain-containing protein. (194 aa)
	S7Q6M4_GLOTA	Uncharacterized protein. (396 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PVH5_GLOTA	S7PW56_GLOTA	S7PVH5	S7PW56	BING4CT-domain-containing protein.	WD40 repeat-like protein.	0.999
S7PVH5_GLOTA	S7PW71_GLOTA	S7PVH5	S7PW71	BING4CT-domain-containing protein.	RNA helicase.	0.874
S7PVH5_GLOTA	S7Q4W8_GLOTA	S7PVH5	S7Q4W8	BING4CT-domain-containing protein.	Fcf1-domain-containing protein.	0.981
S7PVH5_GLOTA	S7Q6M4_GLOTA	S7PVH5	S7Q6M4	BING4CT-domain-containing protein.	Uncharacterized protein.	0.963
S7PVH5_GLOTA	S7Q750_GLOTA	S7PVH5	S7Q750	BING4CT-domain-containing protein.	Uncharacterized protein.	0.968
S7PVH5_GLOTA	S7Q7C5_GLOTA	S7PVH5	S7Q7C5	BING4CT-domain-containing protein.	DRIM domain-containing protein.	0.968
S7PVH5_GLOTA	S7Q8U9_GLOTA	S7PVH5	S7Q8U9	BING4CT-domain-containing protein.	TRAUB-domain-containing protein.	0.997
S7PVH5_GLOTA	S7QCA6_GLOTA	S7PVH5	S7QCA6	BING4CT-domain-containing protein.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.940
S7PVH5_GLOTA	S7QKT7_GLOTA	S7PVH5	S7QKT7	BING4CT-domain-containing protein.	WD40 repeat-like protein.	0.999
S7PVH5_GLOTA	S7QLQ7_GLOTA	S7PVH5	S7QLQ7	BING4CT-domain-containing protein.	Small-subunit processome.	0.999
S7PVH5_GLOTA	S7QNE7_GLOTA	S7PVH5	S7QNE7	BING4CT-domain-containing protein.	NUC189-domain-containing protein.	0.998
S7PVH5_GLOTA	S7QPR9_GLOTA	S7PVH5	S7QPR9	BING4CT-domain-containing protein.	Uncharacterized protein.	0.999
S7PVH5_GLOTA	S7REW6_GLOTA	S7PVH5	S7REW6	BING4CT-domain-containing protein.	Sas10 domain-containing protein.	0.999
S7PVH5_GLOTA	S7RHD5_GLOTA	S7PVH5	S7RHD5	BING4CT-domain-containing protein.	WD40 repeat-like protein.	0.998
S7PVH5_GLOTA	S7RJI9_GLOTA	S7PVH5	S7RJI9	BING4CT-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.982
S7PVH5_GLOTA	S7RQP6_GLOTA	S7PVH5	S7RQP6	BING4CT-domain-containing protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.972
S7PVH5_GLOTA	S7S0H6_GLOTA	S7PVH5	S7S0H6	BING4CT-domain-containing protein.	Fcf1-domain-containing protein.	0.806
S7PVH5_GLOTA	S7S1R3_GLOTA	S7PVH5	S7S1R3	BING4CT-domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
S7PVH5_GLOTA	S7S1R9_GLOTA	S7PVH5	S7S1R9	BING4CT-domain-containing protein.	Uncharacterized protein.	0.998
S7PW56_GLOTA	S7PVH5_GLOTA	S7PW56	S7PVH5	WD40 repeat-like protein.	BING4CT-domain-containing protein.	0.999