24 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7PW91_GLOTA	SET domain-containing protein. (383 aa)
	S7QD75_GLOTA	SET domain-containing protein. (222 aa)
	S7QCH3_GLOTA	Ribosomal lysine N-methyltransferase 4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that monomethylates 60S ribosomal protein L42. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily. (487 aa)
	S7Q7D6_GLOTA	SET domain-containing protein. (427 aa)
	S7Q6V6_GLOTA	SET domain-containing protein. (427 aa)
	S7RH21_GLOTA	SET domain-containing protein. (566 aa)
	S7RHG9_GLOTA	SET domain-containing protein. (129 aa)
	S7RJ44_GLOTA	MYND-type domain-containing protein. (214 aa)
	S7RM03_GLOTA	Uncharacterized protein. (401 aa)
	S7RN24_GLOTA	SET domain-containing protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (797 aa)
	S7RP77_GLOTA	Uncharacterized protein. (448 aa)
	S7RRM5_GLOTA	Uncharacterized protein. (107 aa)
	S7RVU1_GLOTA	SET domain-containing protein. (127 aa)
	S7RX51_GLOTA	Uncharacterized protein. (298 aa)
	S7S313_GLOTA	Post-SET domain-containing protein. (165 aa)
	S7S409_GLOTA	Uncharacterized protein. (233 aa)
	S7S5N8_GLOTA	SET domain-containing protein. (409 aa)
	S7RFF5_GLOTA	SET domain-containing protein. (154 aa)
	S7QNA2_GLOTA	SET domain-containing protein. (190 aa)
	S7QGR5_GLOTA	B30.2/SPRY domain-containing protein. (501 aa)
	S7Q853_GLOTA	Uncharacterized protein. (647 aa)
	S7QFF3_GLOTA	PLC-like phosphodiesterase. (457 aa)
	S7Q402_GLOTA	SET domain-containing protein. (360 aa)
	S7Q041_GLOTA	Uncharacterized protein. (226 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PW91_GLOTA	S7Q402_GLOTA	S7PW91	S7Q402	SET domain-containing protein.	SET domain-containing protein.	0.490
S7PW91_GLOTA	S7Q6V6_GLOTA	S7PW91	S7Q6V6	SET domain-containing protein.	SET domain-containing protein.	0.572
S7PW91_GLOTA	S7Q7D6_GLOTA	S7PW91	S7Q7D6	SET domain-containing protein.	SET domain-containing protein.	0.664
S7PW91_GLOTA	S7QD75_GLOTA	S7PW91	S7QD75	SET domain-containing protein.	SET domain-containing protein.	0.595
S7PW91_GLOTA	S7QFF3_GLOTA	S7PW91	S7QFF3	SET domain-containing protein.	PLC-like phosphodiesterase.	0.404
S7PW91_GLOTA	S7QGR5_GLOTA	S7PW91	S7QGR5	SET domain-containing protein.	B30.2/SPRY domain-containing protein.	0.998
S7PW91_GLOTA	S7RFF5_GLOTA	S7PW91	S7RFF5	SET domain-containing protein.	SET domain-containing protein.	0.484
S7PW91_GLOTA	S7RH21_GLOTA	S7PW91	S7RH21	SET domain-containing protein.	SET domain-containing protein.	0.552
S7PW91_GLOTA	S7RHG9_GLOTA	S7PW91	S7RHG9	SET domain-containing protein.	SET domain-containing protein.	0.417
S7PW91_GLOTA	S7RJ44_GLOTA	S7PW91	S7RJ44	SET domain-containing protein.	MYND-type domain-containing protein.	0.490
S7PW91_GLOTA	S7RM03_GLOTA	S7PW91	S7RM03	SET domain-containing protein.	Uncharacterized protein.	0.417
S7PW91_GLOTA	S7RN24_GLOTA	S7PW91	S7RN24	SET domain-containing protein.	SET domain-containing protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.793
S7PW91_GLOTA	S7RP77_GLOTA	S7PW91	S7RP77	SET domain-containing protein.	Uncharacterized protein.	0.451
S7PW91_GLOTA	S7S5N8_GLOTA	S7PW91	S7S5N8	SET domain-containing protein.	SET domain-containing protein.	0.405
S7Q402_GLOTA	S7PW91_GLOTA	S7Q402	S7PW91	SET domain-containing protein.	SET domain-containing protein.	0.490
S7Q6V6_GLOTA	S7PW91_GLOTA	S7Q6V6	S7PW91	SET domain-containing protein.	SET domain-containing protein.	0.572
S7Q6V6_GLOTA	S7QCH3_GLOTA	S7Q6V6	S7QCH3	SET domain-containing protein.	Ribosomal lysine N-methyltransferase 4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that monomethylates 60S ribosomal protein L42. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.	0.433
S7Q6V6_GLOTA	S7QGR5_GLOTA	S7Q6V6	S7QGR5	SET domain-containing protein.	B30.2/SPRY domain-containing protein.	0.467
S7Q6V6_GLOTA	S7RN24_GLOTA	S7Q6V6	S7RN24	SET domain-containing protein.	SET domain-containing protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.448
S7Q7D6_GLOTA	S7PW91_GLOTA	S7Q7D6	S7PW91	SET domain-containing protein.	SET domain-containing protein.	0.664