147 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7REW6_GLOTA	Sas10 domain-containing protein. (672 aa)
	S7PTX5_GLOTA	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (215 aa)
	S7PTK7_GLOTA	Ribosomal protein L34e. (115 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (463 aa)
	S7S1J8_GLOTA	40S ribosomal protein S17. (145 aa)
	S7S1M4_GLOTA	Nop domain-containing protein. (566 aa)
	S7S1R3_GLOTA	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (393 aa)
	S7S1R9_GLOTA	Uncharacterized protein. (1017 aa)
	S7S2Z1_GLOTA	Ribosomal protein L28e. (139 aa)
	S7S356_GLOTA	WD40 repeat-like protein. (900 aa)
	S7S476_GLOTA	DUF947-domain-containing protein. (400 aa)
	S7S487_GLOTA	Uncharacterized protein. (140 aa)
	S7S4D2_GLOTA	RIO1-domain-containing protein. (324 aa)
	S7S588_GLOTA	Ribosomal protein S14. (56 aa)
	S7QKA7_GLOTA	Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	S7QK73_GLOTA	LTV-domain-containing protein. (545 aa)
	S7QK72_GLOTA	Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	S7QK48_GLOTA	Nep1-domain-containing protein. (237 aa)
	S7QK19_GLOTA	Alpha-L RNA-binding motif-containing protein. (183 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (716 aa)
	S7QK01_GLOTA	Uncharacterized protein. (611 aa)
	S7QJZ7_GLOTA	60S ribosomal protein L18. (186 aa)
	S7QJU7_GLOTA	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (196 aa)
	S7QJ48_GLOTA	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (105 aa)
	S7QIY6_GLOTA	WD40 repeat-like protein. (957 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	S7QI80_GLOTA	Uncharacterized protein. (315 aa)
	S7QGU0_GLOTA	Exonuclease domain-containing protein. (308 aa)
	S7QGE9_GLOTA	Nop14-like protein. (908 aa)
	S7QG64_GLOTA	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (148 aa)
	S7QFX6_GLOTA	S13-like H2TH domain-containing protein; Belongs to the universal ribosomal protein uS13 family. (177 aa)
	S7QFH1_GLOTA	Uncharacterized protein. (370 aa)
	S7QF95_GLOTA	Uncharacterized protein. (149 aa)
	S7QEF4_GLOTA	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (451 aa)
	S7QDK7_GLOTA	Uncharacterized protein. (653 aa)
	S7QDF2_GLOTA	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (156 aa)
	S7QDD3_GLOTA	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (211 aa)
	S7QD84_GLOTA	Fibrillarin. (320 aa)
	S7QCK3_GLOTA	DUF663-domain-containing protein. (799 aa)
	S7QCA6_GLOTA	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (294 aa)
	S7QAZ4_GLOTA	Rpr2-domain-containing protein. (235 aa)
	S7QA13_GLOTA	S1 domain-containing protein. (286 aa)
	S7Q9I1_GLOTA	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	S7Q979_GLOTA	BP28CT domain-containing protein. (2064 aa)
	S7Q8Z9_GLOTA	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (171 aa)
	S7Q8Y1_GLOTA	WD40 repeat-like protein. (512 aa)
	S7Q8G5_GLOTA	Uncharacterized protein. (346 aa)
	S7Q7C5_GLOTA	DRIM domain-containing protein. (1844 aa)
	S7Q750_GLOTA	Uncharacterized protein. (576 aa)
	S7Q6M4_GLOTA	Uncharacterized protein. (396 aa)
	S7Q5A4_GLOTA	Ebp2-domain-containing protein. (417 aa)
	S7Q4W8_GLOTA	Fcf1-domain-containing protein. (194 aa)
	S7Q460_GLOTA	40S ribosomal protein S20. (123 aa)
	S7Q3Y4_GLOTA	DUF663-domain-containing protein. (1140 aa)
	S7Q226_GLOTA	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	S7Q202_GLOTA	Uncharacterized protein. (92 aa)
	S7QKJ9_GLOTA	Casein kinase I isoform delta; Belongs to the protein kinase superfamily. (366 aa)
	S7QKK4_GLOTA	CLP1_P domain-containing protein. (773 aa)
	S7QKT7_GLOTA	WD40 repeat-like protein. (997 aa)
	S7QLM8_GLOTA	Uncharacterized protein. (287 aa)
	S7QLQ1_GLOTA	Spindle pole body component. (878 aa)
	S7QLQ7_GLOTA	Small-subunit processome. (332 aa)
	S7QLY2_GLOTA	BRCT domain-containing protein. (793 aa)
	S7QM46_GLOTA	Uncharacterized protein. (617 aa)
	S7QM98_GLOTA	Exonuclease domain-containing protein. (197 aa)
	S7QMA3_GLOTA	Uncharacterized protein. (411 aa)
	S7QMB9_GLOTA	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (876 aa)
	S7QML5_GLOTA	S1 motif domain-containing protein. (185 aa)
	S7QMU5_GLOTA	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (625 aa)
	S7QN33_GLOTA	Nucleotide-binding protein. (171 aa)
	S7QN63_GLOTA	Cysteine proteinase. (287 aa)
	S7QNC8_GLOTA	Las1-domain-containing protein. (485 aa)
	S7QNE7_GLOTA	NUC189-domain-containing protein. (785 aa)
	S7QNM8_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (578 aa)
	S7QPL1_GLOTA	WD40 repeat-like protein. (486 aa)
	S7QPR9_GLOTA	Uncharacterized protein. (1479 aa)
	S7R8U5_GLOTA	Casein kinase-like protein I isoform epsilon CKIe. (321 aa)
	S7RBK4_GLOTA	U3 small nucleolar RNA-associated protein 22. (1117 aa)
	S7RC22_GLOTA	Uncharacterized protein. (73 aa)
	S7RD62_GLOTA	WD40 repeat-like protein. (878 aa)
	S7REF5_GLOTA	Uncharacterized protein. (86 aa)
	S7PU87_GLOTA	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	S7RFN9_GLOTA	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	S7RGD0_GLOTA	Alpha-L RNA-binding motif-containing protein. (370 aa)
	S7RGZ3_GLOTA	Ribosomal protein S8. (154 aa)
	S7RHD5_GLOTA	WD40 repeat-like protein. (583 aa)
	S7RIM0_GLOTA	Uncharacterized protein. (274 aa)
	S7RIU8_GLOTA	RNase_PH domain-containing protein. (267 aa)
	S7RJI9_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (1379 aa)
	S7RJM2_GLOTA	Kinase-like protein. (531 aa)
	S7RJU6_GLOTA	Nop-domain-containing protein. (537 aa)
	S7RK45_GLOTA	HRDC domain-containing protein. (877 aa)
	S7QKB5_GLOTA	60S ribosomal protein L2/L8. (254 aa)
	S7RKG5_GLOTA	Uncharacterized protein. (413 aa)
	S7RKL7_GLOTA	Protein kinase. (315 aa)
	S7RKM6_GLOTA	Uncharacterized protein. (132 aa)
	S7RLG1_GLOTA	Exonuclease domain-containing protein. (372 aa)
	S7RN20_GLOTA	Uncharacterized protein. (187 aa)
	S7RP23_GLOTA	Uncharacterized protein. (702 aa)
	S7RP27_GLOTA	40S ribosomal protein S19. (157 aa)
	S7RPX0_GLOTA	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (611 aa)
	S7RQP6_GLOTA	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (561 aa)
	S7RRL6_GLOTA	Uncharacterized protein. (832 aa)
	S7RRU1_GLOTA	40S ribosomal protein S5-1; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	S7RSF8_GLOTA	Uncharacterized protein. (238 aa)
	S7RT93_GLOTA	Ribosomal protein L37ae. (91 aa)
	S7RU89_GLOTA	Utp21-domain-containing protein. (949 aa)
	S7RVB0_GLOTA	Uncharacterized protein. (281 aa)
	S7RVE1_GLOTA	Ribosomal protein S12/S23. (169 aa)
	S7RVV9_GLOTA	Uncharacterized protein. (210 aa)
	S7RVY5_GLOTA	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (525 aa)
	S7RW65_GLOTA	Uncharacterized protein. (69 aa)
	S7RWM4_GLOTA	Brix-domain-containing protein. (306 aa)
	S7RX02_GLOTA	WD40 repeat-like protein. (524 aa)
	S7RXA3_GLOTA	Bystin-domain-containing protein. (450 aa)
	S7RXD4_GLOTA	Uncharacterized protein. (212 aa)
	S7RXE2_GLOTA	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	S7RY01_GLOTA	Ribosomal protein S5 domain 2-like protein. (262 aa)
	S7RY33_GLOTA	18S rRNA biogenesis protein. (365 aa)
	S7RZK4_GLOTA	RNase_PH domain-containing protein. (286 aa)
	S7RZU3_GLOTA	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	S7RZZ9_GLOTA	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (154 aa)
	S7S070_GLOTA	Ipi1_N domain-containing protein. (743 aa)
	S7S080_GLOTA	RIX1 domain-containing protein. (293 aa)
	S7S098_GLOTA	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (477 aa)
	S7S0B1_GLOTA	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (663 aa)
	S7S0B6_GLOTA	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (741 aa)
	S7S0P4_GLOTA	WD40 repeat-like protein. (883 aa)
	S7S0S0_GLOTA	40S ribosomal protein S27. (83 aa)
	S7Q0A8_GLOTA	P-loop containing nucleoside triphosphate hydrolase protein. (466 aa)
	S7PZP7_GLOTA	Ribosomal protein S5 domain 2-like protein. (338 aa)
	S7PZG5_GLOTA	Ribosomal protein S5 domain 2-like protein. (296 aa)
	S7PZ86_GLOTA	Uncharacterized protein. (86 aa)
	S7PYI5_GLOTA	S10_plectin domain-containing protein. (148 aa)
	S7PXX1_GLOTA	Uncharacterized protein. (299 aa)
	S7PX10_GLOTA	CBF-domain-containing protein. (608 aa)
	S7PWE4_GLOTA	PHP domain-like protein. (290 aa)
	S7PW56_GLOTA	WD40 repeat-like protein. (446 aa)
	S7PW26_GLOTA	RNase_PH domain-containing protein. (307 aa)
	S7PVN7_GLOTA	Antiviral helicase. (1015 aa)
	S7PVH5_GLOTA	BING4CT-domain-containing protein. (616 aa)
	S7PV84_GLOTA	Uncharacterized protein. (924 aa)
	S7PV17_GLOTA	Glycerol-3-phosphate 1-acyltransferase. (514 aa)
	S7PUV5_GLOTA	ULP_PROTEASE domain-containing protein. (1041 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	S7QK06	S7QMZ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	S7PTK7_GLOTA	S7QK06	S7PTK7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein L34e.	0.886
ERB1	S7PUV5_GLOTA	S7QK06	S7PUV5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ULP_PROTEASE domain-containing protein.	0.584
ERB1	S7PV84_GLOTA	S7QK06	S7PV84	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.881
ERB1	S7PVH5_GLOTA	S7QK06	S7PVH5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	BING4CT-domain-containing protein.	0.915
ERB1	S7PVN7_GLOTA	S7QK06	S7PVN7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Antiviral helicase.	0.837
ERB1	S7PW56_GLOTA	S7QK06	S7PW56	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD40 repeat-like protein.	0.497
ERB1	S7PX10_GLOTA	S7QK06	S7PX10	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF-domain-containing protein.	0.726
ERB1	S7Q0A8_GLOTA	S7QK06	S7Q0A8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	P-loop containing nucleoside triphosphate hydrolase protein.	0.989
ERB1	S7Q3Y4_GLOTA	S7QK06	S7Q3Y4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DUF663-domain-containing protein.	0.846
ERB1	S7Q5A4_GLOTA	S7QK06	S7Q5A4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ebp2-domain-containing protein.	0.995
ERB1	S7Q750_GLOTA	S7QK06	S7Q750	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.522
ERB1	S7Q7C5_GLOTA	S7QK06	S7Q7C5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DRIM domain-containing protein.	0.522
ERB1	S7Q8Y1_GLOTA	S7QK06	S7Q8Y1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD40 repeat-like protein.	0.967
ERB1	S7Q979_GLOTA	S7QK06	S7Q979	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	BP28CT domain-containing protein.	0.903
ERB1	S7QCK3_GLOTA	S7QK06	S7QCK3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DUF663-domain-containing protein.	0.900
ERB1	S7QD84_GLOTA	S7QK06	S7QD84	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Fibrillarin.	0.893
ERB1	S7QDK7_GLOTA	S7QK06	S7QDK7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.489
ERB1	S7QEF4_GLOTA	S7QK06	S7QEF4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.937
ERB1	S7QF95_GLOTA	S7QK06	S7QF95	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.491