31 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	S7S5X3_GLOTA	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1218 aa)
	S7S4I0_GLOTA	Cyclin-like protein; Belongs to the cyclin family. (356 aa)
	S7RZF0_GLOTA	RNA polymerase Rpb6. (113 aa)
	S7RXN0_GLOTA	DNA repair helicase. (795 aa)
	S7RWI6_GLOTA	Uncharacterized protein. (859 aa)
	S7RW72_GLOTA	Insert subdomain of RNA polymerase alpha subunit. (287 aa)
	S7RW47_GLOTA	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (446 aa)
	S7RTQ9_GLOTA	MAT1-domain-containing protein. (356 aa)
	S7RTI2_GLOTA	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (370 aa)
	S7RRM2_GLOTA	Transcription factor Tfb4. (325 aa)
	S7RES5_GLOTA	RPB5 subunit of DNA-directed RNA polymerase. (208 aa)
	S7RER4_GLOTA	DNA repair helicase rad25. (771 aa)
	S7REB6_GLOTA	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1135 aa)
	S7RE64_GLOTA	Uncharacterized protein. (325 aa)
	S7QNN1_GLOTA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1674 aa)
	S7QMR3_GLOTA	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (157 aa)
	S7QKB1_GLOTA	Uncharacterized protein. (877 aa)
	S7QK37_GLOTA	Uncharacterized protein. (71 aa)
	S7QHU7_GLOTA	Nuclear cap-binding protein subunit 2. (226 aa)
	S7QFS5_GLOTA	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (428 aa)
	S7QFC2_GLOTA	Uncharacterized protein. (128 aa)
	S7QE67_GLOTA	mRNA cap guanine-N7 methyltransferase. (407 aa)
	S7QBI2_GLOTA	BSD domain-containing protein. (605 aa)
	S7QB43_GLOTA	RPOL4c domain-containing protein. (134 aa)
	S7QA26_GLOTA	Uncharacterized protein. (170 aa)
	S7Q1U0_GLOTA	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (470 aa)
	S7Q0J7_GLOTA	DNA repair helicase rad25. (809 aa)
	S7PXW1_GLOTA	Uncharacterized protein. (74 aa)
	S7PWV8_GLOTA	RBP11-like subunits of RNA polymerase. (143 aa)
	S7PW64_GLOTA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	S7PW25_GLOTA	Uncharacterized protein. (56 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PW25_GLOTA	S7PW64_GLOTA	S7PW25	S7PW64	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.794
S7PW25_GLOTA	S7PWV8_GLOTA	S7PW25	S7PWV8	Uncharacterized protein.	RBP11-like subunits of RNA polymerase.	0.792
S7PW25_GLOTA	S7PXW1_GLOTA	S7PW25	S7PXW1	Uncharacterized protein.	Uncharacterized protein.	0.806
S7PW25_GLOTA	S7Q0J7_GLOTA	S7PW25	S7Q0J7	Uncharacterized protein.	DNA repair helicase rad25.	0.894
S7PW25_GLOTA	S7Q1U0_GLOTA	S7PW25	S7Q1U0	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
S7PW25_GLOTA	S7QA26_GLOTA	S7PW25	S7QA26	Uncharacterized protein.	Uncharacterized protein.	0.792
S7PW25_GLOTA	S7QB43_GLOTA	S7PW25	S7QB43	Uncharacterized protein.	RPOL4c domain-containing protein.	0.796
S7PW25_GLOTA	S7QBI2_GLOTA	S7PW25	S7QBI2	Uncharacterized protein.	BSD domain-containing protein.	0.988
S7PW25_GLOTA	S7QK37_GLOTA	S7PW25	S7QK37	Uncharacterized protein.	Uncharacterized protein.	0.807
S7PW25_GLOTA	S7QMR3_GLOTA	S7PW25	S7QMR3	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.801
S7PW25_GLOTA	S7QNN1_GLOTA	S7PW25	S7QNN1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.790
S7PW25_GLOTA	S7RE64_GLOTA	S7PW25	S7RE64	Uncharacterized protein.	Uncharacterized protein.	0.792
S7PW25_GLOTA	S7RER4_GLOTA	S7PW25	S7RER4	Uncharacterized protein.	DNA repair helicase rad25.	0.894
S7PW25_GLOTA	S7RES5_GLOTA	S7PW25	S7RES5	Uncharacterized protein.	RPB5 subunit of DNA-directed RNA polymerase.	0.792
S7PW25_GLOTA	S7RRM2_GLOTA	S7PW25	S7RRM2	Uncharacterized protein.	Transcription factor Tfb4.	0.996
S7PW25_GLOTA	S7RTI2_GLOTA	S7PW25	S7RTI2	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.802
S7PW25_GLOTA	S7RTQ9_GLOTA	S7PW25	S7RTQ9	Uncharacterized protein.	MAT1-domain-containing protein.	0.926
S7PW25_GLOTA	S7RW47_GLOTA	S7PW25	S7RW47	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.991
S7PW25_GLOTA	S7RW72_GLOTA	S7PW25	S7RW72	Uncharacterized protein.	Insert subdomain of RNA polymerase alpha subunit.	0.792
S7PW25_GLOTA	S7RWI6_GLOTA	S7PW25	S7RWI6	Uncharacterized protein.	Uncharacterized protein.	0.792