32 items (Gloeophyllum trabeum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S7QFF8_GLOTA	TBP-domain-containing protein. (310 aa)
	S7PXY6_GLOTA	Histone H2B; Belongs to the histone H2B family. (147 aa)
	S7PXW1_GLOTA	Uncharacterized protein. (74 aa)
	S7PW25_GLOTA	Uncharacterized protein. (56 aa)
	S7S4I0_GLOTA	Cyclin-like protein; Belongs to the cyclin family. (356 aa)
	S7S1V5_GLOTA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	S7S137_GLOTA	BTB domain-containing protein. (829 aa)
	S7S136_GLOTA	Uncharacterized protein. (525 aa)
	S7S0C4_GLOTA	RNA polymerase I-specific transcription initiation factor RRN3. (752 aa)
	S7S067_GLOTA	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1725 aa)
	S7RZF0_GLOTA	RNA polymerase Rpb6. (113 aa)
	S7RY06_GLOTA	Histone H2B; Belongs to the histone H2B family. (156 aa)
	S7RXN0_GLOTA	DNA repair helicase. (795 aa)
	S7RW47_GLOTA	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (446 aa)
	S7RTQ9_GLOTA	MAT1-domain-containing protein. (356 aa)
	S7RTI2_GLOTA	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (370 aa)
	S7RRM2_GLOTA	Transcription factor Tfb4. (325 aa)
	S7RQZ4_GLOTA	BTB domain-containing protein. (501 aa)
	S7RLW8_GLOTA	RPOLD domain-containing protein. (364 aa)
	S7RES5_GLOTA	RPB5 subunit of DNA-directed RNA polymerase. (208 aa)
	S7RER4_GLOTA	DNA repair helicase rad25. (771 aa)
	S7QP79_GLOTA	SprT-like domain-containing protein. (587 aa)
	S7QMR3_GLOTA	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (157 aa)
	S7QK97_GLOTA	Ubiquitin. (80 aa)
	S7QK37_GLOTA	Uncharacterized protein. (71 aa)
	S7QJC9_GLOTA	Uncharacterized protein. (689 aa)
	S7QGC0_GLOTA	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1230 aa)
	S7QCD2_GLOTA	Uncharacterized protein. (359 aa)
	S7QBI2_GLOTA	BSD domain-containing protein. (605 aa)
	S7Q765_GLOTA	RNA polymerase I associated factor, A49-like protein. (425 aa)
	S7Q1U0_GLOTA	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (470 aa)
	S7Q0J7_GLOTA	DNA repair helicase rad25. (809 aa)

Your Current Organism:

Gloeophyllum trabeum

NCBI taxonomy Id: 670483
Other names: G. trabeum ATCC 11539, Gloeophyllum trabeum ATCC 11539

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S7PW25_GLOTA	S7PXW1_GLOTA	S7PW25	S7PXW1	Uncharacterized protein.	Uncharacterized protein.	0.806
S7PW25_GLOTA	S7Q0J7_GLOTA	S7PW25	S7Q0J7	Uncharacterized protein.	DNA repair helicase rad25.	0.894
S7PW25_GLOTA	S7Q1U0_GLOTA	S7PW25	S7Q1U0	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
S7PW25_GLOTA	S7QBI2_GLOTA	S7PW25	S7QBI2	Uncharacterized protein.	BSD domain-containing protein.	0.988
S7PW25_GLOTA	S7QFF8_GLOTA	S7PW25	S7QFF8	Uncharacterized protein.	TBP-domain-containing protein.	0.793
S7PW25_GLOTA	S7QGC0_GLOTA	S7PW25	S7QGC0	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.689
S7PW25_GLOTA	S7QK37_GLOTA	S7PW25	S7QK37	Uncharacterized protein.	Uncharacterized protein.	0.807
S7PW25_GLOTA	S7QMR3_GLOTA	S7PW25	S7QMR3	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.801
S7PW25_GLOTA	S7RER4_GLOTA	S7PW25	S7RER4	Uncharacterized protein.	DNA repair helicase rad25.	0.894
S7PW25_GLOTA	S7RES5_GLOTA	S7PW25	S7RES5	Uncharacterized protein.	RPB5 subunit of DNA-directed RNA polymerase.	0.792
S7PW25_GLOTA	S7RLW8_GLOTA	S7PW25	S7RLW8	Uncharacterized protein.	RPOLD domain-containing protein.	0.709
S7PW25_GLOTA	S7RRM2_GLOTA	S7PW25	S7RRM2	Uncharacterized protein.	Transcription factor Tfb4.	0.996
S7PW25_GLOTA	S7RTI2_GLOTA	S7PW25	S7RTI2	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.802
S7PW25_GLOTA	S7RTQ9_GLOTA	S7PW25	S7RTQ9	Uncharacterized protein.	MAT1-domain-containing protein.	0.926
S7PW25_GLOTA	S7RW47_GLOTA	S7PW25	S7RW47	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.991
S7PW25_GLOTA	S7RXN0_GLOTA	S7PW25	S7RXN0	Uncharacterized protein.	DNA repair helicase.	0.983
S7PW25_GLOTA	S7RZF0_GLOTA	S7PW25	S7RZF0	Uncharacterized protein.	RNA polymerase Rpb6.	0.792
S7PW25_GLOTA	S7S137_GLOTA	S7PW25	S7S137	Uncharacterized protein.	BTB domain-containing protein.	0.725
S7PW25_GLOTA	S7S1V5_GLOTA	S7PW25	S7S1V5	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.668
S7PW25_GLOTA	S7S4I0_GLOTA	S7PW25	S7S4I0	Uncharacterized protein.	Cyclin-like protein; Belongs to the cyclin family.	0.724