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| | DAMO_3170 | Periplasmic sensor signal transduction histidine kinase precursor. (481 aa) |
| | DAMO_3139 | Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (892 aa) |
| | lspA | Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II); This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (162 aa) |
| | DAMO_3130 | Protein of unknown function; No homology to any previously reported sequences. (337 aa) |
| | DAMO_3128 | Homologs of previously reported genes of unknown function. (120 aa) |
| | DAMO_3116 | Homologs of previously reported genes of unknown function. (322 aa) |
| | DAMO_3115 | Putative Serine protease do-like precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (494 aa) |
| | DAMO_3041 | Protein of unknown function; No homology to any previously reported sequences. (176 aa) |
| | DAMO_3018 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (627 aa) |
| | glnD | Bifunctional uridylyltransferase/uridylyl-removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (932 aa) |
| | DAMO_3010 | Putative Multi-sensor signal transduction histidine kinase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (557 aa) |
| | DAMO_3001 | Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (249 aa) |
| | ybeY | Conserved protein of unknown function; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (146 aa) |
| | DAMO_2981 | Protein of unknown function; No homology to any previously reported sequences. (380 aa) |
| | DAMO_2973 | Peptidyl-prolyl cis-trans isomerase (modular protein). (187 aa) |
| | DAMO_2876 | Sensor protein. (466 aa) |
| | tldD | Putative peptidase TldD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (490 aa) |
| | DAMO_2858 | Homologs of previously reported genes of unknown function. (447 aa) |
| | DAMO_2846 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (214 aa) |
| | DAMO_2838 | Periplasmic sensor signal transduction histidine kinase precursor. (493 aa) |
| | DAMO_2817 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (518 aa) |
| | DAMO_2807 | Homologs of previously reported genes of unknown function. (188 aa) |
| | htpX | Putative protease htpX homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase M48B family. (283 aa) |
| | cypB | Peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B) (Cyclophilin ScCypB) (S-cyclophilin); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (199 aa) |
| | lon | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (856 aa) |
| | DAMO_2616 | Protein of unknown function; No homology to any previously reported sequences. (522 aa) |
| | DAMO_2615 | Protein of unknown function; No homology to any previously reported sequences. (517 aa) |
| | DAMO_2614 | Membrane protein of unknown function; No homology to any previously reported sequences. (338 aa) |
| | DAMO_2594 | Putative response regulator in two-component regulatory system (CheY-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (123 aa) |
| | DAMO_2593 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (571 aa) |
| | DAMO_2533 | Putative PpiC-type peptidyl-prolyl cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (351 aa) |
| | ctpA | Carboxy-terminal-processing protease precursor (C-terminal-processing protease); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family. (446 aa) |
| | DAMO_2467 | Putative Zinc metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (376 aa) |
| | ftsH-3 | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (642 aa) |
| | DAMO_2361 | Protein of unknown function; No homology to any previously reported sequences. (306 aa) |
| | DAMO_2360 | Protein of unknown function; No homology to any previously reported sequences. (318 aa) |
| | DAMO_2359 | Protein of unknown function; No homology to any previously reported sequences. (331 aa) |
| | DAMO_2357 | Protein of unknown function; No homology to any previously reported sequences. (322 aa) |
| | DAMO_2258 | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. (212 aa) |
| | prmC | Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (297 aa) |
| | DAMO_2182 | Putative Tetratricopeptide TPR_2 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (304 aa) |
| | clpP | ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp); Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (205 aa) |
| | tig | Putative Trigger factor (TF); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (431 aa) |
| | DAMO_2129 | Putative Uncharacterized metalloprotease yhfN (PSP23); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (422 aa) |
| | DAMO_2078 | Homologs of previously reported genes of unknown function. (362 aa) |
| | pcm-2 | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (220 aa) |
| | DAMO_2064 | Putative peptidase, S54 (Rhomboid) family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (231 aa) |
| | DAMO_2014 | Protein of unknown function; No homology to any previously reported sequences. (96 aa) |
| | DAMO_1978 | Homologs of previously reported genes of unknown function. (79 aa) |
| | DAMO_1971 | DNA/RNA non-specific endonuclease (fragment). (338 aa) |
| | DAMO_1899 | Exported protein of unknown function; No homology to any previously reported sequences. (194 aa) |
| | DAMO_1879 | Protein of unknown function; No homology to any previously reported sequences. (146 aa) |
| | DAMO_1877 | Putative Multi-sensor signal transduction histidine kinase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (601 aa) |
| | DAMO_1867 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (441 aa) |
| | mrcA | Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (DD-transpeptidase)]. (739 aa) |
| | DAMO_1829 | Protein of unknown function; No homology to any previously reported sequences. (256 aa) |
| | cheA | Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator. (604 aa) |
| | cheR | Chemotaxis protein methyltransferase; Function of strongly homologous gene; enzyme. (305 aa) |
| | cheB | Chemotaxis Response Regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (353 aa) |
| | DAMO_1816 | Protein of unknown function; No homology to any previously reported sequences. (232 aa) |
| | DAMO_1780 | Sensor protein (fragment). (683 aa) |
| | DAMO_1767 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (351 aa) |
| | DAMO_1761 | Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (445 aa) |
| | DAMO_1709 | Exported protein of unknown function; No homology to any previously reported sequences. (338 aa) |
| | DAMO_1635 | Membrane protein of unknown function; No homology to any previously reported sequences. (324 aa) |
| | DAMO_1608 | Homologs of previously reported genes of unknown function. (348 aa) |
| | lipB | Lipoate biosynthesis protein B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (243 aa) |
| | DAMO_1573 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (383 aa) |
| | ftsH-2 | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (603 aa) |
| | DAMO_1553 | Peptidase M22, glycoprotease. (234 aa) |
| | DAMO_1544 | Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (480 aa) |
| | DAMO_1533 | Putative Multi-sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (477 aa) |
| | lgt | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (262 aa) |
| | DAMO_1514 | Putative phosphotransferase Gmet_3384; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. (305 aa) |
| | radC-2 | DNA repair protein radC homolog; Belongs to the UPF0758 family. (245 aa) |
| | DAMO_1465 | Exported protein of unknown function; No homology to any previously reported sequences. (214 aa) |
| | DAMO_1448 | Peptidase M28. (292 aa) |
| | trxA | Fragment of Anthranilate synthase [Includes: Glutamine amidotransferase] (part 1); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thioredoxin family. (109 aa) |
| | pcm | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (213 aa) |
| | DAMO_1371 | Signal peptide peptidase SppA, 36K type precursor. (290 aa) |
| | DAMO_1308 | Sensor protein (fragment). (316 aa) |
| | DAMO_1300 | Protein of unknown function; No homology to any previously reported sequences. (552 aa) |
| | DAMO_1299 | Protein of unknown function; No homology to any previously reported sequences. (106 aa) |
| | lexA | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (197 aa) |
| | celM | Cellulase. (738 aa) |
| | DAMO_1267 | Response regulator receiver protein. (126 aa) |
| | DAMO_1266 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (528 aa) |
| | DAMO_1238 | Protein of unknown function; No homology to any previously reported sequences. (355 aa) |
| | DAMO_1233 | Membrane protein of unknown function; No homology to any previously reported sequences. (155 aa) |
| | DAMO_1178 | Transposase. (311 aa) |
| | DAMO_1128 | Putative Sensor protein yycG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (610 aa) |
| | arsC | Protein arsC (Arsenate reductase) (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase). (161 aa) |
| | DAMO_1076 | Fragment of conserved hypothetical protein (part 2); Homologs of previously reported genes of unknown function. (252 aa) |
| | DAMO_1057 | Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory regi [...] (1048 aa) |
| | DAMO_1030 | Homologs of previously reported genes of unknown function. (313 aa) |
| | DAMO_1029 | Putative Mov34/MPN/PAD-1 family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (162 aa) |
| | DAMO_0996 | Putative ATP-dependent protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (823 aa) |
| | ftsH | Cell division protein ftsH homolog (ATP-dependent zinc-metallo protease); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (616 aa) |
| | DAMO_0904 | Protein of unknown function; No homology to any previously reported sequences. (336 aa) |
| | DAMO_0901 | Protein of unknown function; No homology to any previously reported sequences. (105 aa) |
| | DAMO_0895 | Exported protein of unknown function; No homology to any previously reported sequences. (351 aa) |
| | DAMO_0892 | Peptidase C1A, papain. (304 aa) |
| | DAMO_0869 | Putative Peptidoglycan glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (812 aa) |
| | DAMO_0859 | Putative Nitrogen assimilation transcription regulation protein (ntrB) (synonyms:glnR, glnL); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (405 aa) |
| | pepA | Putative cytosol aminopeptidase (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (506 aa) |
| | DAMO_0753 | Homologs of previously reported genes of unknown function. (452 aa) |
| | DAMO_0752 | Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (231 aa) |
| | DAMO_0751 | Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (283 aa) |
| | DAMO_0750 | Putative proteasome component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (494 aa) |
| | DAMO_0744 | Response regulator receiver protein. (397 aa) |
| | DAMO_0742 | Homologs of previously reported genes of unknown function. (100 aa) |
| | DAMO_0739 | Histidine kinase. (156 aa) |
| | DAMO_0663 | BirA biofunctional protein, putative (fragment). (276 aa) |
| | DAMO_0638 | Multimodular transpeptidase-transglycosylase. (682 aa) |
| | map | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (259 aa) |
| | DAMO_0480 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (697 aa) |
| | DAMO_0446 | Homologs of previously reported genes of unknown function. (230 aa) |
| | DAMO_0445 | Membrane protein, putative (fragment). (224 aa) |
| | DAMO_0444 | Homologs of previously reported genes of unknown function. (271 aa) |
| | DAMO_0419 | Predicted aminopeptidase. (310 aa) |
| | DAMO_0416 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (942 aa) |
| | kdpD | Two-component system, OmpR family, sensor histidine kinase KdpD; Function of strongly homologous gene; regulator. (900 aa) |
| | DAMO_0316 | Membrane protein of unknown function; No homology to any previously reported sequences. (321 aa) |
| | DAMO_0277 | Peptidylprolyl isomerase (modular protein). (223 aa) |
| | DAMO_0230 | Membrane protein of unknown function; No homology to any previously reported sequences. (172 aa) |
| | DAMO_0212 | Protein of unknown function; No homology to any previously reported sequences. (336 aa) |
| | DAMO_0194 | Putative Protein-tyrosine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (769 aa) |
| | DAMO_0177 | Peptidase M48, Ste24p precursor. (266 aa) |
| | DAMO_0142 | Homologs of previously reported genes of unknown function. (160 aa) |
| | DAMO_0117 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (295 aa) |
| | DAMO_0099 | Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (492 aa) |
| | radC | DNA repair protein radC homolog; Belongs to the UPF0758 family. (236 aa) |
| | hslU | ATPase component of the HslUV protease, also functions as molecular chaperone; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (451 aa) |
| | hslV | ATP-dependent protease hslV (protease subunit of a proteasome-like degradation complex); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (159 aa) |
| | DAMO_0058 | Putative Serine-type D-Ala-D-Ala carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. (355 aa) |
| | DAMO_0007 | Peptidase S1 and S6, chymotrypsin/Hap. (372 aa) |
