STRINGSTRING
alaS alaS DAMO_2904 DAMO_2904 DAMO_0277 DAMO_0277 DAMO_0749 DAMO_0749 DAMO_0751 DAMO_0751 DAMO_0752 DAMO_0752 DAMO_0987 DAMO_0987 DAMO_0998 DAMO_0998 DAMO_2768 DAMO_2768
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (886 aa)
DAMO_2904Homologs of previously reported genes of unknown function. (483 aa)
DAMO_0277Peptidylprolyl isomerase (modular protein). (223 aa)
DAMO_0749Homologs of previously reported genes of unknown function; Belongs to the AAA ATPase family. (609 aa)
DAMO_0751Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (283 aa)
DAMO_0752Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (231 aa)
DAMO_0987Putative HspC2 heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the small heat shock protein (HSP20) family. (147 aa)
DAMO_0998Protein of unknown function; No homology to any previously reported sequences; Belongs to the small heat shock protein (HSP20) family. (174 aa)
DAMO_2768Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. (150 aa)
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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