47 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4YEX6_WALMC	Ribosomal protein S5 domain 2-like protein. (422 aa)
	I4YK21_WALMC	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (306 aa)
	I4YJV7_WALMC	WD40 repeat-like protein. (460 aa)
	I4YHH1_WALMC	Ribosomal protein S5 domain 2-like protein. (254 aa)
	I4YH85_WALMC	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
	I4YGB8_WALMC	CLP1_P domain-containing protein. (645 aa)
	I4YFY3_WALMC	RNA-3'-phosphate cyclase. (357 aa)
	I4YFM7_WALMC	Krr1-domain-containing protein. (681 aa)
	I4YFL6_WALMC	Uncharacterized protein. (247 aa)
	I4YF66_WALMC	Ribosomal protein S8e. (260 aa)
	I4YF52_WALMC	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (86 aa)
	I4YES6_WALMC	S-adenosyl-L-methionine-dependent methyltransferase. (276 aa)
	I4YEM7_WALMC	Brix-domain-containing protein. (303 aa)
	I4YEE8_WALMC	BING4CT-domain-containing protein. (553 aa)
	I4YE99_WALMC	Uncharacterized protein. (228 aa)
	I4YDX4_WALMC	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (419 aa)
	I4YD97_WALMC	WD_REPEATS_REGION domain-containing protein. (861 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (629 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (842 aa)
	I4YBK7_WALMC	Uncharacterized protein. (278 aa)
	I4YBI4_WALMC	KH_dom_type_1 domain-containing protein. (171 aa)
	I4YBD9_WALMC	CBF-domain-containing protein. (465 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (770 aa)
	I4YAV9_WALMC	S1 domain-containing protein. (302 aa)
	I4YAS3_WALMC	Mak16-domain-containing protein. (1174 aa)
	I4YAM9_WALMC	Uncharacterized protein. (634 aa)
	I4Y9Y5_WALMC	Bystin-domain-containing protein. (433 aa)
	I4Y9T7_WALMC	Uncharacterized protein. (1098 aa)
	I4Y9Q1_WALMC	Uncharacterized protein. (172 aa)
	I4Y9N8_WALMC	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (149 aa)
	I4Y9B9_WALMC	POP1-domain-containing protein. (700 aa)
	I4Y8W2_WALMC	RNB-domain-containing protein; Belongs to the RNR ribonuclease family. (939 aa)
	I4Y8U1_WALMC	Exonuclease domain-containing protein. (587 aa)
	I4Y8T3_WALMC	Uncharacterized protein. (240 aa)
	I4Y8P3_WALMC	Small-subunit processome. (909 aa)
	I4Y8M1_WALMC	Exosome complex exonuclease rrp45. (286 aa)
	I4Y8J2_WALMC	EXOSC1 domain-containing protein. (187 aa)
	I4Y7S3_WALMC	Fcf2-domain-containing protein. (277 aa)
	I4Y7I5_WALMC	Pre-rRNA-processing protein PNO1. (223 aa)
	I4Y7C7_WALMC	Las1-domain-containing protein. (204 aa)
	I4Y746_WALMC	Brix-domain-containing protein. (359 aa)
	I4Y6T6_WALMC	RNase_PH domain-containing protein. (286 aa)
	I4Y6P0_WALMC	Fcf1-domain-containing protein. (194 aa)
	I4Y6J8_WALMC	Uncharacterized protein. (1842 aa)
	I4Y669_WALMC	HRDC domain-containing protein. (789 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (428 aa)
	I4Y5A8_WALMC	Antiviral helicase. (1067 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	I4Y5A8_WALMC	I4YAY8	I4Y5A8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Antiviral helicase.	0.809
ERB1	I4Y6J8_WALMC	I4YAY8	I4Y6J8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.614
ERB1	I4Y746_WALMC	I4YAY8	I4Y746	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain-containing protein.	0.975
ERB1	I4Y7C7_WALMC	I4YAY8	I4Y7C7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Las1-domain-containing protein.	0.758
ERB1	I4Y7I5_WALMC	I4YAY8	I4Y7I5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-rRNA-processing protein PNO1.	0.575
ERB1	I4Y8P3_WALMC	I4YAY8	I4Y8P3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small-subunit processome.	0.824
ERB1	I4Y9T7_WALMC	I4YAY8	I4Y9T7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.914
ERB1	I4Y9Y5_WALMC	I4YAY8	I4Y9Y5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Bystin-domain-containing protein.	0.913
ERB1	I4YAM9_WALMC	I4YAY8	I4YAM9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.898
ERB1	I4YAS3_WALMC	I4YAY8	I4YAS3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Mak16-domain-containing protein.	0.950
ERB1	I4YBD9_WALMC	I4YAY8	I4YBD9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF-domain-containing protein.	0.782
ERB1	I4YBK7_WALMC	I4YAY8	I4YBK7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.436
ERB1	I4YD97_WALMC	I4YAY8	I4YD97	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.951
ERB1	I4YDX4_WALMC	I4YAY8	I4YDX4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.925
ERB1	I4YEE8_WALMC	I4YAY8	I4YEE8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	BING4CT-domain-containing protein.	0.928
ERB1	I4YEM7_WALMC	I4YAY8	I4YEM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain-containing protein.	0.996
ERB1	I4YF66_WALMC	I4YAY8	I4YF66	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein S8e.	0.988
ERB1	I4YFL6_WALMC	I4YAY8	I4YFL6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.778
ERB1	I4YFM7_WALMC	I4YAY8	I4YFM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Krr1-domain-containing protein.	0.436
ERB1	I4YFY3_WALMC	I4YAY8	I4YFY3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA-3'-phosphate cyclase.	0.692