(53 nodes) Endosomal transport network (Wallemia mellicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4Y9Z7_WALMC	FAD dependent oxidoreductase. (392 aa)
	I4Y5A1_WALMC	Uncharacterized protein. (211 aa)
	I4Y5C1_WALMC	Vacuolar protein sorting-associated protein 26. (298 aa)
	I4Y5W3_WALMC	Uncharacterized protein. (1008 aa)
	I4Y5Z6_WALMC	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (209 aa)
	I4Y629_WALMC	PX domain-containing protein. (434 aa)
	I4Y6M2_WALMC	Putative vacuolar protein-sorting-associated protein. (205 aa)
	I4Y792_WALMC	Thioredoxin reductase. (329 aa)
	I4Y7C1_WALMC	Uncharacterized protein. (393 aa)
	I4Y7X6_WALMC	Uncharacterized protein. (596 aa)
	I4Y813_WALMC	ESCRT-II complex, vps25 subunit. (167 aa)
	I4Y820_WALMC	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (779 aa)
	I4Y8H4_WALMC	Phox-like protein. (129 aa)
	I4Y8I3_WALMC	Uncharacterized protein. (266 aa)
	I4Y8J1_WALMC	Uncharacterized protein. (554 aa)
	I4Y8K7_WALMC	WD40 repeat-like protein. (321 aa)
	I4Y8Y4_WALMC	Vacuolar sorting protein VPS24. (215 aa)
	I4Y940_WALMC	AAA-domain-containing protein; Belongs to the AAA ATPase family. (437 aa)
	I4Y991_WALMC	Putative cytoplasm protein. (373 aa)
	I4Y9R5_WALMC	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (810 aa)
	I4Y9Z3_WALMC	Uncharacterized protein. (607 aa)
	I4YA26_WALMC	Vacuolar protein sorting 55. (130 aa)
	I4YAF0_WALMC	Rgp1-domain-containing protein. (539 aa)
	I4YAG3_WALMC	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (832 aa)
	I4YAS7_WALMC	DUF605-domain-containing protein. (324 aa)
	I4YAS9_WALMC	Vps5-domain-containing protein. (483 aa)
	I4YAT6_WALMC	FYVE-domain-containing protein. (434 aa)
	I4YBB8_WALMC	PX domain-containing protein. (520 aa)
	I4YBR5_WALMC	Uncharacterized protein. (472 aa)
	I4YBR8_WALMC	ARM repeat-containing protein. (1755 aa)
	I4YBT7_WALMC	Uncharacterized protein. (143 aa)
	I4YBZ1_WALMC	BRO1-domain-containing protein. (945 aa)
	I4YCB2_WALMC	ENTH-domain-containing protein. (447 aa)
	I4YCT6_WALMC	Uncharacterized protein. (208 aa)
	I4YDA6_WALMC	RIC1-domain-containing protein. (839 aa)
	I4YDD7_WALMC	Uncharacterized protein. (1007 aa)
	I4YDI4_WALMC	Snf7-domain-containing protein. (238 aa)
	I4YDQ8_WALMC	VHS-domain-containing protein. (856 aa)
	I4YDZ8_WALMC	Uncharacterized protein. (414 aa)
	I4YF24_WALMC	Got1-domain-containing protein. (138 aa)
	I4YF75_WALMC	Uncharacterized protein. (193 aa)
	I4YFE1_WALMC	Snf7-domain-containing protein. (228 aa)
	I4YG38_WALMC	PX domain-containing protein. (545 aa)
	I4YGW4_WALMC	Uncharacterized protein. (243 aa)
	I4YHD1_WALMC	AP-1 complex subunit gamma. (804 aa)
	I4YHL0_WALMC	FAD dependent oxidoreductase. (394 aa)
	I4YI56_WALMC	Winged helix DNA-binding domain-containing protein. (249 aa)
	I4YIG3_WALMC	V-snare-domain-containing protein. (219 aa)
	I4YJB5_WALMC	Uncharacterized protein. (374 aa)
	I4YJM4_WALMC	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (290 aa)
	I4YJN7_WALMC	Uncharacterized protein. (688 aa)
	I4YJQ5_WALMC	Vps54 domain-containing protein. (1777 aa)
	Ryh1	GTP-binding protein ryh1. (208 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I4Y5C1_WALMC	I4Y629_WALMC	I4Y5C1	I4Y629	Vacuolar protein sorting-associated protein 26.	PX domain-containing protein.	0.708
I4Y5C1_WALMC	I4Y8H4_WALMC	I4Y5C1	I4Y8H4	Vacuolar protein sorting-associated protein 26.	Phox-like protein.	0.982
I4Y5C1_WALMC	I4Y9Z3_WALMC	I4Y5C1	I4Y9Z3	Vacuolar protein sorting-associated protein 26.	Uncharacterized protein.	0.848
I4Y5C1_WALMC	I4YAG3_WALMC	I4Y5C1	I4YAG3	Vacuolar protein sorting-associated protein 26.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
I4Y5C1_WALMC	I4YAS9_WALMC	I4Y5C1	I4YAS9	Vacuolar protein sorting-associated protein 26.	Vps5-domain-containing protein.	0.985
I4Y5C1_WALMC	I4YBB8_WALMC	I4Y5C1	I4YBB8	Vacuolar protein sorting-associated protein 26.	PX domain-containing protein.	0.647
I4Y5C1_WALMC	I4YBR5_WALMC	I4Y5C1	I4YBR5	Vacuolar protein sorting-associated protein 26.	Uncharacterized protein.	0.521
I4Y5C1_WALMC	I4YG38_WALMC	I4Y5C1	I4YG38	Vacuolar protein sorting-associated protein 26.	PX domain-containing protein.	0.602
I4Y5C1_WALMC	I4YGW4_WALMC	I4Y5C1	I4YGW4	Vacuolar protein sorting-associated protein 26.	Uncharacterized protein.	0.998
I4Y5C1_WALMC	Ryh1	I4Y5C1	I4YJY1	Vacuolar protein sorting-associated protein 26.	GTP-binding protein ryh1.	0.444
I4Y5Z6_WALMC	I4Y6M2_WALMC	I4Y5Z6	I4Y6M2	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Putative vacuolar protein-sorting-associated protein.	0.658
I4Y5Z6_WALMC	I4Y7C1_WALMC	I4Y5Z6	I4Y7C1	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.603
I4Y5Z6_WALMC	I4Y813_WALMC	I4Y5Z6	I4Y813	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	ESCRT-II complex, vps25 subunit.	0.980
I4Y5Z6_WALMC	I4Y8Y4_WALMC	I4Y5Z6	I4Y8Y4	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Vacuolar sorting protein VPS24.	0.867
I4Y5Z6_WALMC	I4Y940_WALMC	I4Y5Z6	I4Y940	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	AAA-domain-containing protein; Belongs to the AAA ATPase family.	0.795
I4Y5Z6_WALMC	I4YAS7_WALMC	I4Y5Z6	I4YAS7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	DUF605-domain-containing protein.	0.629
I4Y5Z6_WALMC	I4YAT6_WALMC	I4Y5Z6	I4YAT6	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	FYVE-domain-containing protein.	0.862
I4Y5Z6_WALMC	I4YBR5_WALMC	I4Y5Z6	I4YBR5	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.992
I4Y5Z6_WALMC	I4YBT7_WALMC	I4Y5Z6	I4YBT7	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.891
I4Y5Z6_WALMC	I4YBZ1_WALMC	I4Y5Z6	I4YBZ1	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	BRO1-domain-containing protein.	0.542