43 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4Y5C4_WALMC	Plasma membrane fusion protein PRM1; Involved in cell fusion during mating by stabilizing the plasma membrane fusion event; Belongs to the PRM1 family. (586 aa)
	I4Y602_WALMC	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (817 aa)
	I4Y6C0_WALMC	SH3 domain-containing protein. (102 aa)
	Rvs167p	BAR-domain-containing protein. (410 aa)
	I4Y6W0_WALMC	Uncharacterized protein. (643 aa)
	Orb6	Kinase-like protein. (536 aa)
	I4Y793_WALMC	Ras GEF. (1356 aa)
	I4Y7Z5_WALMC	RhoGAP-domain-containing protein. (983 aa)
	I4Y835_WALMC	EF-hand; Belongs to the calmodulin family. (149 aa)
	I4Y9J5_WALMC	Uncharacterized protein. (1668 aa)
	I4Y9V4_WALMC	Uncharacterized protein. (194 aa)
	I4Y9X6_WALMC	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (164 aa)
	I4YA59_WALMC	Sec3-PIP2_bind domain-containing protein. (1070 aa)
	I4YAJ7_WALMC	Cell division/GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (330 aa)
	I4YAQ1_WALMC	Uncharacterized protein. (217 aa)
	I4YAU1_WALMC	Vesicle fusion-related protein. (724 aa)
	I4YB61_WALMC	E set domain-containing protein. (202 aa)
	I4YBF0_WALMC	Uncharacterized protein. (799 aa)
	I4YBI0_WALMC	EF-hand. (169 aa)
	I4YBP5_WALMC	Uncharacterized protein. (147 aa)
	I4YCD2_WALMC	Uncharacterized protein. (225 aa)
	I4YCF9_WALMC	Uncharacterized protein. (157 aa)
	I4YD58_WALMC	Uncharacterized protein. (1187 aa)
	I4YD62_WALMC	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (328 aa)
	I4YD81_WALMC	GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (360 aa)
	I4YDE7_WALMC	Casein kinase I isoform delta; Belongs to the protein kinase superfamily. (359 aa)
	Rvs161p	BAR-domain-containing protein. (261 aa)
	I4YE57_WALMC	Uncharacterized protein. (1021 aa)
	I4YEE1_WALMC	EF-hand protein. (140 aa)
	I4YEI2_WALMC	Uncharacterized protein. (238 aa)
	I4YES5_WALMC	Adenylyl cyclase-associated protein; Belongs to the CAP family. (525 aa)
	I4YFF8_WALMC	SH3 domain-containing protein. (1339 aa)
	I4YFM4_WALMC	Uncharacterized protein. (2106 aa)
	I4YG68_WALMC	Rho GTPase activation protein. (957 aa)
	Bud6p	AIP3-domain-containing protein. (927 aa)
	I4YGB4_WALMC	SH3 domain-containing protein. (1700 aa)
	I4YHQ5_WALMC	Uncharacterized protein. (896 aa)
	I4YIP1_WALMC	Uncharacterized protein. (161 aa)
	I4YIQ2_WALMC	ARM repeat-containing protein. (587 aa)
	I4YIZ3_WALMC	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (761 aa)
	I4YJH0_WALMC	PH domain-containing protein. (1400 aa)
	I4YJQ8_WALMC	Mo25-like protein. (335 aa)
	I4YJT6_WALMC	Serine/threonine-protein kinase. (707 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bud6p	I4Y9J5_WALMC	I4YGA5	I4Y9J5	AIP3-domain-containing protein.	Uncharacterized protein.	0.827
Bud6p	I4Y9V4_WALMC	I4YGA5	I4Y9V4	AIP3-domain-containing protein.	Uncharacterized protein.	0.620
Bud6p	I4YBF0_WALMC	I4YGA5	I4YBF0	AIP3-domain-containing protein.	Uncharacterized protein.	0.679
Bud6p	I4YBP5_WALMC	I4YGA5	I4YBP5	AIP3-domain-containing protein.	Uncharacterized protein.	0.609
Bud6p	I4YGB4_WALMC	I4YGA5	I4YGB4	AIP3-domain-containing protein.	SH3 domain-containing protein.	0.533
Bud6p	I4YHQ5_WALMC	I4YGA5	I4YHQ5	AIP3-domain-containing protein.	Uncharacterized protein.	0.448
I4Y602_WALMC	I4YA59_WALMC	I4Y602	I4YA59	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Sec3-PIP2_bind domain-containing protein.	0.603
I4Y602_WALMC	I4YAU1_WALMC	I4Y602	I4YAU1	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Vesicle fusion-related protein.	0.823
I4Y602_WALMC	I4YIZ3_WALMC	I4Y602	I4YIZ3	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.778
I4Y6C0_WALMC	I4Y6W0_WALMC	I4Y6C0	I4Y6W0	SH3 domain-containing protein.	Uncharacterized protein.	0.846
I4Y6C0_WALMC	Rvs161p	I4Y6C0	I4YE17	SH3 domain-containing protein.	BAR-domain-containing protein.	0.841
I4Y6W0_WALMC	I4Y6C0_WALMC	I4Y6W0	I4Y6C0	Uncharacterized protein.	SH3 domain-containing protein.	0.846
I4Y6W0_WALMC	I4Y9X6_WALMC	I4Y6W0	I4Y9X6	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.756
I4Y6W0_WALMC	I4YES5_WALMC	I4Y6W0	I4YES5	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.971
I4Y6W0_WALMC	Rvs161p	I4Y6W0	I4YE17	Uncharacterized protein.	BAR-domain-containing protein.	0.593
I4Y6W0_WALMC	Rvs167p	I4Y6W0	I4Y6Q0	Uncharacterized protein.	BAR-domain-containing protein.	0.974
I4Y793_WALMC	I4Y9V4_WALMC	I4Y793	I4Y9V4	Ras GEF.	Uncharacterized protein.	0.556
I4Y793_WALMC	I4YG68_WALMC	I4Y793	I4YG68	Ras GEF.	Rho GTPase activation protein.	0.767
I4Y793_WALMC	I4YHQ5_WALMC	I4Y793	I4YHQ5	Ras GEF.	Uncharacterized protein.	0.528
I4Y793_WALMC	I4YJH0_WALMC	I4Y793	I4YJH0	Ras GEF.	PH domain-containing protein.	0.586