29 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Orb6	Kinase-like protein. (536 aa)
	I4Y7E4_WALMC	Rho GTPase activation protein. (759 aa)
	I4Y7F1_WALMC	Uncharacterized protein. (267 aa)
	I4Y7K7_WALMC	PH-domain-containing protein. (474 aa)
	I4YHQ5_WALMC	Uncharacterized protein. (896 aa)
	I4YIQ2_WALMC	ARM repeat-containing protein. (587 aa)
	I4YJI3_WALMC	Septin; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (456 aa)
	I4YJQ8_WALMC	Mo25-like protein. (335 aa)
	I4Y8M7_WALMC	WD40 repeat-like protein. (564 aa)
	I4Y960_WALMC	PhyH-domain-containing protein. (384 aa)
	I4Y9J5_WALMC	Uncharacterized protein. (1668 aa)
	I4Y9V4_WALMC	Uncharacterized protein. (194 aa)
	I4Y9X6_WALMC	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (164 aa)
	I4YA58_WALMC	Uncharacterized protein. (337 aa)
	I4YA59_WALMC	Sec3-PIP2_bind domain-containing protein. (1070 aa)
	I4YAJ7_WALMC	Cell division/GTP binding protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (330 aa)
	I4YCG3_WALMC	Heme peroxidase. (634 aa)
	I4YCP0_WALMC	Uncharacterized protein. (125 aa)
	I4YD58_WALMC	Uncharacterized protein. (1187 aa)
	I4YDB9_WALMC	DNase I-like protein. (1105 aa)
	Rvs161p	BAR-domain-containing protein. (261 aa)
	I4YFC6_WALMC	Voltage-gated potassium channel. (420 aa)
	I4YFK9_WALMC	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. (658 aa)
	I4YFM4_WALMC	Uncharacterized protein. (2106 aa)
	Bud6p	AIP3-domain-containing protein. (927 aa)
	I4Y5C4_WALMC	Plasma membrane fusion protein PRM1; Involved in cell fusion during mating by stabilizing the plasma membrane fusion event; Belongs to the PRM1 family. (586 aa)
	I4Y5P6_WALMC	The Sh3 domain of Betapix in complex with A high affinity peptide from Pak2. (51 aa)
	I4Y6C0_WALMC	SH3 domain-containing protein. (102 aa)
	Rvs167p	BAR-domain-containing protein. (410 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bud6p	I4Y9J5_WALMC	I4YGA5	I4Y9J5	AIP3-domain-containing protein.	Uncharacterized protein.	0.827
Bud6p	I4Y9V4_WALMC	I4YGA5	I4Y9V4	AIP3-domain-containing protein.	Uncharacterized protein.	0.620
Bud6p	I4YHQ5_WALMC	I4YGA5	I4YHQ5	AIP3-domain-containing protein.	Uncharacterized protein.	0.448
I4Y5P6_WALMC	I4Y9V4_WALMC	I4Y5P6	I4Y9V4	The Sh3 domain of Betapix in complex with A high affinity peptide from Pak2.	Uncharacterized protein.	0.469
I4Y6C0_WALMC	Rvs161p	I4Y6C0	I4YE17	SH3 domain-containing protein.	BAR-domain-containing protein.	0.841
I4Y7E4_WALMC	I4Y9J5_WALMC	I4Y7E4	I4Y9J5	Rho GTPase activation protein.	Uncharacterized protein.	0.456
I4Y7E4_WALMC	I4Y9V4_WALMC	I4Y7E4	I4Y9V4	Rho GTPase activation protein.	Uncharacterized protein.	0.570
I4Y9J5_WALMC	Bud6p	I4Y9J5	I4YGA5	Uncharacterized protein.	AIP3-domain-containing protein.	0.827
I4Y9J5_WALMC	I4Y7E4_WALMC	I4Y9J5	I4Y7E4	Uncharacterized protein.	Rho GTPase activation protein.	0.456
I4Y9J5_WALMC	I4Y9V4_WALMC	I4Y9J5	I4Y9V4	Uncharacterized protein.	Uncharacterized protein.	0.780
I4Y9J5_WALMC	I4YHQ5_WALMC	I4Y9J5	I4YHQ5	Uncharacterized protein.	Uncharacterized protein.	0.628
I4Y9V4_WALMC	Bud6p	I4Y9V4	I4YGA5	Uncharacterized protein.	AIP3-domain-containing protein.	0.620
I4Y9V4_WALMC	I4Y5P6_WALMC	I4Y9V4	I4Y5P6	Uncharacterized protein.	The Sh3 domain of Betapix in complex with A high affinity peptide from Pak2.	0.469
I4Y9V4_WALMC	I4Y7E4_WALMC	I4Y9V4	I4Y7E4	Uncharacterized protein.	Rho GTPase activation protein.	0.570
I4Y9V4_WALMC	I4Y9J5_WALMC	I4Y9V4	I4Y9J5	Uncharacterized protein.	Uncharacterized protein.	0.780
I4Y9V4_WALMC	I4Y9X6_WALMC	I4Y9V4	I4Y9X6	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.411
I4Y9V4_WALMC	I4YA59_WALMC	I4Y9V4	I4YA59	Uncharacterized protein.	Sec3-PIP2_bind domain-containing protein.	0.811
I4Y9V4_WALMC	I4YD58_WALMC	I4Y9V4	I4YD58	Uncharacterized protein.	Uncharacterized protein.	0.681
I4Y9V4_WALMC	I4YFK9_WALMC	I4Y9V4	I4YFK9	Uncharacterized protein.	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.	0.524
I4Y9V4_WALMC	I4YFM4_WALMC	I4Y9V4	I4YFM4	Uncharacterized protein.	Uncharacterized protein.	0.546