36 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4YAI2_WALMC	RNA-binding domain-containing protein. (324 aa)
	I4YB03_WALMC	Cwf21-domain-containing protein. (263 aa)
	I4YC26_WALMC	TPR-like protein. (687 aa)
	I4YCG1_WALMC	DUF572-domain-containing protein. (171 aa)
	I4YCH0_WALMC	RRM domain-containing protein. (368 aa)
	I4YCZ4_WALMC	GH16 domain-containing protein. (309 aa)
	I4YEC8_WALMC	CPSF_A domain-containing protein. (1208 aa)
	I4YEF8_WALMC	RRM domain-containing protein. (286 aa)
	I4YEG4_WALMC	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (89 aa)
	I4YEY3_WALMC	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (509 aa)
	I4YFY5_WALMC	Uncharacterized protein. (534 aa)
	I4YG17_WALMC	TPR-like protein. (962 aa)
	I4YH62_WALMC	Uncharacterized protein. (671 aa)
	I4YHP3_WALMC	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (318 aa)
	I4YHT9_WALMC	TFP11-domain-containing protein. (863 aa)
	I4YID0_WALMC	P-loop containing nucleoside triphosphate hydrolase protein. (988 aa)
	I4YJI1_WALMC	L domain-like protein. (240 aa)
	I4YJP2_WALMC	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (115 aa)
	I4YJU9_WALMC	Uncharacterized protein. (206 aa)
	I4Y558_WALMC	RRM domain-containing protein. (630 aa)
	I4Y5F0_WALMC	Prp18-domain-containing protein. (324 aa)
	I4Y5U6_WALMC	Uncharacterized protein. (492 aa)
	I4Y5Z7_WALMC	Sm-like ribonucleo protein. (179 aa)
	I4Y687_WALMC	Matrin-type domain-containing protein. (232 aa)
	I4Y6L1_WALMC	Uncharacterized protein. (642 aa)
	I4Y6M1_WALMC	YrdC-like domain-containing protein. (799 aa)
	I4Y7D6_WALMC	MFAP1 domain-containing protein. (365 aa)
	I4Y8H6_WALMC	U1-type domain-containing protein. (197 aa)
	I4Y8L6_WALMC	Uncharacterized protein. (651 aa)
	I4Y8M3_WALMC	RNA-binding domain-containing protein. (260 aa)
	I4Y8R4_WALMC	ARM repeat-containing protein. (1152 aa)
	I4Y8X8_WALMC	Zf-U1-domain-containing protein. (102 aa)
	I4Y933_WALMC	Uncharacterized protein. (391 aa)
	I4Y9N9_WALMC	LUC7-domain-containing protein. (328 aa)
	I4YA24_WALMC	Nuclear cap-binding protein subunit 2. (175 aa)
	I4YAX8_WALMC	RRM domain-containing protein. (150 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I4Y558_WALMC	I4Y5U6_WALMC	I4Y558	I4Y5U6	RRM domain-containing protein.	Uncharacterized protein.	0.551
I4Y558_WALMC	I4Y5Z7_WALMC	I4Y558	I4Y5Z7	RRM domain-containing protein.	Sm-like ribonucleo protein.	0.916
I4Y558_WALMC	I4Y687_WALMC	I4Y558	I4Y687	RRM domain-containing protein.	Matrin-type domain-containing protein.	0.789
I4Y558_WALMC	I4Y8L6_WALMC	I4Y558	I4Y8L6	RRM domain-containing protein.	Uncharacterized protein.	0.968
I4Y558_WALMC	I4Y8M3_WALMC	I4Y558	I4Y8M3	RRM domain-containing protein.	RNA-binding domain-containing protein.	0.609
I4Y558_WALMC	I4Y8R4_WALMC	I4Y558	I4Y8R4	RRM domain-containing protein.	ARM repeat-containing protein.	0.854
I4Y558_WALMC	I4Y8X8_WALMC	I4Y558	I4Y8X8	RRM domain-containing protein.	Zf-U1-domain-containing protein.	0.994
I4Y558_WALMC	I4Y933_WALMC	I4Y558	I4Y933	RRM domain-containing protein.	Uncharacterized protein.	0.726
I4Y558_WALMC	I4Y9N9_WALMC	I4Y558	I4Y9N9	RRM domain-containing protein.	LUC7-domain-containing protein.	0.997
I4Y558_WALMC	I4YA24_WALMC	I4Y558	I4YA24	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.990
I4Y558_WALMC	I4YAI2_WALMC	I4Y558	I4YAI2	RRM domain-containing protein.	RNA-binding domain-containing protein.	0.994
I4Y558_WALMC	I4YAX8_WALMC	I4Y558	I4YAX8	RRM domain-containing protein.	RRM domain-containing protein.	0.622
I4Y558_WALMC	I4YB03_WALMC	I4Y558	I4YB03	RRM domain-containing protein.	Cwf21-domain-containing protein.	0.784
I4Y558_WALMC	I4YCH0_WALMC	I4Y558	I4YCH0	RRM domain-containing protein.	RRM domain-containing protein.	0.640
I4Y558_WALMC	I4YCZ4_WALMC	I4Y558	I4YCZ4	RRM domain-containing protein.	GH16 domain-containing protein.	0.726
I4Y558_WALMC	I4YEC8_WALMC	I4Y558	I4YEC8	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.979
I4Y558_WALMC	I4YEG4_WALMC	I4Y558	I4YEG4	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.634
I4Y558_WALMC	I4YH62_WALMC	I4Y558	I4YH62	RRM domain-containing protein.	Uncharacterized protein.	0.664
I4Y558_WALMC	I4YJI1_WALMC	I4Y558	I4YJI1	RRM domain-containing protein.	L domain-like protein.	0.989
I4Y558_WALMC	I4YJP2_WALMC	I4Y558	I4YJP2	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.854