15 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4YAI6_WALMC	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (545 aa)
	I4Y614_WALMC	YL1_C domain-containing protein. (169 aa)
	I4Y7K4_WALMC	Ubiquitin/40s ribosomal protein S27a fusion. (158 aa)
	I4Y8G6_WALMC	Uncharacterized protein. (1300 aa)
	I4Y8S6_WALMC	UV excision repair protein Rad23. (336 aa)
	I4YCZ9_WALMC	EF-hand. (184 aa)
	I4YFW6_WALMC	RING-box protein 1. (107 aa)
	I4YG53_WALMC	Uncharacterized protein. (526 aa)
	I4YGX5_WALMC	NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30. (202 aa)
	I4YH32_WALMC	Actin-like ATPase domain-containing protein; Belongs to the actin family. (669 aa)
	I4YIU6_WALMC	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (583 aa)
	I4YJ14_WALMC	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (471 aa)
	I4Y919_WALMC	JAB_MPN domain-containing protein. (263 aa)
	I4Y9Q7_WALMC	PCI-domain-containing protein. (478 aa)
	I4Y5E2_WALMC	Ubiquitin. (701 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I4Y5E2_WALMC	I4Y7K4_WALMC	I4Y5E2	I4Y7K4	Ubiquitin.	Ubiquitin/40s ribosomal protein S27a fusion.	0.991
I4Y5E2_WALMC	I4Y8S6_WALMC	I4Y5E2	I4Y8S6	Ubiquitin.	UV excision repair protein Rad23.	0.987
I4Y5E2_WALMC	I4Y919_WALMC	I4Y5E2	I4Y919	Ubiquitin.	JAB_MPN domain-containing protein.	0.726
I4Y5E2_WALMC	I4Y9Q7_WALMC	I4Y5E2	I4Y9Q7	Ubiquitin.	PCI-domain-containing protein.	0.670
I4Y5E2_WALMC	I4YAI6_WALMC	I4Y5E2	I4YAI6	Ubiquitin.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.408
I4Y5E2_WALMC	I4YCZ9_WALMC	I4Y5E2	I4YCZ9	Ubiquitin.	EF-hand.	0.661
I4Y5E2_WALMC	I4YFW6_WALMC	I4Y5E2	I4YFW6	Ubiquitin.	RING-box protein 1.	0.901
I4Y5E2_WALMC	I4YG53_WALMC	I4Y5E2	I4YG53	Ubiquitin.	Uncharacterized protein.	0.678
I4Y5E2_WALMC	I4YGX5_WALMC	I4Y5E2	I4YGX5	Ubiquitin.	NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30.	0.915
I4Y614_WALMC	I4Y8G6_WALMC	I4Y614	I4Y8G6	YL1_C domain-containing protein.	Uncharacterized protein.	0.897
I4Y614_WALMC	I4YFW6_WALMC	I4Y614	I4YFW6	YL1_C domain-containing protein.	RING-box protein 1.	0.522
I4Y614_WALMC	I4YH32_WALMC	I4Y614	I4YH32	YL1_C domain-containing protein.	Actin-like ATPase domain-containing protein; Belongs to the actin family.	0.998
I4Y614_WALMC	I4YIU6_WALMC	I4Y614	I4YIU6	YL1_C domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.984
I4Y614_WALMC	I4YJ14_WALMC	I4Y614	I4YJ14	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.995
I4Y7K4_WALMC	I4Y5E2_WALMC	I4Y7K4	I4Y5E2	Ubiquitin/40s ribosomal protein S27a fusion.	Ubiquitin.	0.991
I4Y7K4_WALMC	I4Y8S6_WALMC	I4Y7K4	I4Y8S6	Ubiquitin/40s ribosomal protein S27a fusion.	UV excision repair protein Rad23.	0.830
I4Y7K4_WALMC	I4Y919_WALMC	I4Y7K4	I4Y919	Ubiquitin/40s ribosomal protein S27a fusion.	JAB_MPN domain-containing protein.	0.680
I4Y7K4_WALMC	I4Y9Q7_WALMC	I4Y7K4	I4Y9Q7	Ubiquitin/40s ribosomal protein S27a fusion.	PCI-domain-containing protein.	0.667
I4Y7K4_WALMC	I4YAI6_WALMC	I4Y7K4	I4YAI6	Ubiquitin/40s ribosomal protein S27a fusion.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.485
I4Y7K4_WALMC	I4YCZ9_WALMC	I4Y7K4	I4YCZ9	Ubiquitin/40s ribosomal protein S27a fusion.	EF-hand.	0.620