47 items (Wallemia mellicola) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4YGE4_WALMC	DNA repair helicase rad25. (772 aa)
	I4YJR7_WALMC	RPB5 subunit of DNA-directed RNA polymerase. (207 aa)
	I4YK15_WALMC	Histone-fold-containing protein. (170 aa)
	I4YK02_WALMC	Transcription elongation factor. (282 aa)
	I4YG17_WALMC	TPR-like protein. (962 aa)
	I4YFW6_WALMC	RING-box protein 1. (107 aa)
	I4YFJ6_WALMC	Transcription factor Tfb4. (272 aa)
	I4YFG7_WALMC	Rotamase D. (363 aa)
	I4YFA1_WALMC	Replication factor A protein 3. (111 aa)
	I4YEN7_WALMC	S1 motif domain-containing protein. (171 aa)
	I4YEG6_WALMC	DNA replication factor C, large subunit. (753 aa)
	I4YEG0_WALMC	Replication protein A, subunit RPA32. (272 aa)
	I4YEC5_WALMC	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1198 aa)
	I4YE28_WALMC	Rve-domain-containing protein. (177 aa)
	I4YD86_WALMC	AAA domain-containing protein. (459 aa)
	I4YD10_WALMC	Uncharacterized protein. (88 aa)
	I4YCP1_WALMC	Cyclin-like protein; Belongs to the cyclin family. (371 aa)
	I4YC37_WALMC	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (599 aa)
	I4YC35_WALMC	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (449 aa)
	I4YBY1_WALMC	WD40 repeat-like protein. (509 aa)
	I4YBL8_WALMC	DNA-directed RNA polymerase II subunit RPB3. (316 aa)
	I4YG67_WALMC	DNA clamp loader. (356 aa)
	I4YBG3_WALMC	Uncharacterized protein. (392 aa)
	HOR2	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (352 aa)
	I4YAD1_WALMC	DNA repair helicase. (776 aa)
	I4Y9L8_WALMC	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (444 aa)
	I4Y9L4_WALMC	RNA polymerase Rpb6. (90 aa)
	I4Y971_WALMC	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1752 aa)
	I4Y8X1_WALMC	Uncharacterized protein. (267 aa)
	I4Y894_WALMC	Cysteine proteinase; Belongs to the peptidase C19 family. (1110 aa)
	I4Y841_WALMC	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (136 aa)
	I4Y7T8_WALMC	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (141 aa)
	I4Y7K4_WALMC	Ubiquitin/40s ribosomal protein S27a fusion. (158 aa)
	I4Y706_WALMC	CULLIN_2 domain-containing protein; Belongs to the cullin family. (843 aa)
	I4Y6J1_WALMC	CPSF_A domain-containing protein. (986 aa)
	I4YJ50_WALMC	RPOL4c domain-containing protein. (134 aa)
	I4YJ44_WALMC	P-loop containing nucleoside triphosphate hydrolase protein. (335 aa)
	I4Y5V5_WALMC	Uncharacterized protein. (531 aa)
	I4YJ25_WALMC	RNA-binding domain-containing protein. (111 aa)
	I4YIQ6_WALMC	Uncharacterized protein. (1036 aa)
	I4YHD7_WALMC	P-loop containing nucleoside triphosphate hydrolase protein. (331 aa)
	I4Y5E2_WALMC	Ubiquitin. (701 aa)
	I4YGZ8_WALMC	FAD/NAD(P)-binding domain-containing protein. (503 aa)
	I4YGX5_WALMC	NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30. (202 aa)
	I4YGW1_WALMC	CDK-activating kinase assembly factor. (352 aa)
	I4YGU6_WALMC	P-loop containing nucleoside triphosphate hydrolase protein. (331 aa)
	I4YGT0_WALMC	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HOR2	I4Y5E2_WALMC	I4YBC8	I4Y5E2	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin.	0.627
HOR2	I4Y5V5_WALMC	I4YBC8	I4Y5V5	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.974
HOR2	I4Y6J1_WALMC	I4YBC8	I4Y6J1	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	CPSF_A domain-containing protein.	0.678
HOR2	I4Y706_WALMC	I4YBC8	I4Y706	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.655
HOR2	I4Y7K4_WALMC	I4YBC8	I4Y7K4	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin/40s ribosomal protein S27a fusion.	0.612
HOR2	I4Y7T8_WALMC	I4YBC8	I4Y7T8	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.793
HOR2	I4Y841_WALMC	I4YBC8	I4Y841	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.789
HOR2	I4Y971_WALMC	I4YBC8	I4Y971	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992
HOR2	I4Y9L4_WALMC	I4YBC8	I4Y9L4	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase Rpb6.	0.803
HOR2	I4Y9L8_WALMC	I4YBC8	I4Y9L8	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.983
HOR2	I4YAD1_WALMC	I4YBC8	I4YAD1	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA repair helicase.	0.993
HOR2	I4YBL8_WALMC	I4YBC8	I4YBL8	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase II subunit RPB3.	0.911
HOR2	I4YC35_WALMC	I4YBC8	I4YC35	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.975
HOR2	I4YCP1_WALMC	I4YBC8	I4YCP1	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin-like protein; Belongs to the cyclin family.	0.998
HOR2	I4YD10_WALMC	I4YBC8	I4YD10	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.785
HOR2	I4YEC5_WALMC	I4YBC8	I4YEC5	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.866
HOR2	I4YEN7_WALMC	I4YBC8	I4YEN7	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	S1 motif domain-containing protein.	0.877
HOR2	I4YFJ6_WALMC	I4YBC8	I4YFJ6	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Transcription factor Tfb4.	0.998
HOR2	I4YFW6_WALMC	I4YBC8	I4YFW6	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	RING-box protein 1.	0.622
HOR2	I4YGE4_WALMC	I4YBC8	I4YGE4	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	DNA repair helicase rad25.	0.983