21 items (Wallemia mellicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I4Y5V0_WALMC	Dihydroxy-acid dehydratase. (581 aa)
	I4Y7D1_WALMC	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (298 aa)
	I4Y7U3_WALMC	CoaE-domain-containing protein. (241 aa)
	I4YAT5_WALMC	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (398 aa)
	I4YAX1_WALMC	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
	I4YB20_WALMC	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (513 aa)
	I4YB44_WALMC	Nucleotidylyl transferase. (295 aa)
	I4YBJ3_WALMC	3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate. (297 aa)
	I4YC54_WALMC	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (340 aa)
	I4YCD3_WALMC	Flavo protein. (181 aa)
	I4YCU7_WALMC	DNA/pantothenate metabolism flavo protein. (273 aa)
	I4YCW3_WALMC	Pantoate-beta-alanine ligase. (302 aa)
	I4YEW5_WALMC	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (316 aa)
	I4YFH1_WALMC	Fumble. (480 aa)
	I4YG86_WALMC	Acetolactate synthase. (599 aa)
	I4YG96_WALMC	Dihydroxy-acid dehydratase. (610 aa)
	I4YHQ7_WALMC	Acetolactate synthase. (322 aa)
	I4YHY6_WALMC	Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (390 aa)
	I4YI78_WALMC	Indole-3-acetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)
	I4YJA3_WALMC	4'-phosphopantetheinyl transferase. (281 aa)
	I4YK25_WALMC	ApbA-domain-containing protein. (354 aa)

Your Current Organism:

Wallemia mellicola

NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I4Y5V0_WALMC	I4YAT5_WALMC	I4Y5V0	I4YAT5	Dihydroxy-acid dehydratase.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.991
I4Y5V0_WALMC	I4YBJ3_WALMC	I4Y5V0	I4YBJ3	Dihydroxy-acid dehydratase.	3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.	0.935
I4Y5V0_WALMC	I4YG86_WALMC	I4Y5V0	I4YG86	Dihydroxy-acid dehydratase.	Acetolactate synthase.	0.908
I4Y5V0_WALMC	I4YG96_WALMC	I4Y5V0	I4YG96	Dihydroxy-acid dehydratase.	Dihydroxy-acid dehydratase.	0.903
I4Y5V0_WALMC	I4YHQ7_WALMC	I4Y5V0	I4YHQ7	Dihydroxy-acid dehydratase.	Acetolactate synthase.	0.683
I4Y5V0_WALMC	I4YHY6_WALMC	I4Y5V0	I4YHY6	Dihydroxy-acid dehydratase.	Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.	0.968
I4Y7D1_WALMC	I4YBJ3_WALMC	I4Y7D1	I4YBJ3	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.	0.931
I4Y7D1_WALMC	I4YC54_WALMC	I4Y7D1	I4YC54	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	0.910
I4Y7D1_WALMC	I4YCW3_WALMC	I4Y7D1	I4YCW3	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	Pantoate-beta-alanine ligase.	0.934
I4Y7D1_WALMC	I4YEW5_WALMC	I4Y7D1	I4YEW5	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	0.910
I4Y7D1_WALMC	I4YG86_WALMC	I4Y7D1	I4YG86	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	Acetolactate synthase.	0.480
I4Y7D1_WALMC	I4YK25_WALMC	I4Y7D1	I4YK25	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	ApbA-domain-containing protein.	0.900
I4Y7U3_WALMC	I4YAT5_WALMC	I4Y7U3	I4YAT5	CoaE-domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.578
I4Y7U3_WALMC	I4YB44_WALMC	I4Y7U3	I4YB44	CoaE-domain-containing protein.	Nucleotidylyl transferase.	0.984
I4Y7U3_WALMC	I4YBJ3_WALMC	I4Y7U3	I4YBJ3	CoaE-domain-containing protein.	3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.	0.613
I4Y7U3_WALMC	I4YCD3_WALMC	I4Y7U3	I4YCD3	CoaE-domain-containing protein.	Flavo protein.	0.726
I4Y7U3_WALMC	I4YCU7_WALMC	I4Y7U3	I4YCU7	CoaE-domain-containing protein.	DNA/pantothenate metabolism flavo protein.	0.735
I4Y7U3_WALMC	I4YCW3_WALMC	I4Y7U3	I4YCW3	CoaE-domain-containing protein.	Pantoate-beta-alanine ligase.	0.685
I4Y7U3_WALMC	I4YFH1_WALMC	I4Y7U3	I4YFH1	CoaE-domain-containing protein.	Fumble.	0.619
I4Y7U3_WALMC	I4YJA3_WALMC	I4Y7U3	I4YJA3	CoaE-domain-containing protein.	4'-phosphopantetheinyl transferase.	0.911