(10 nodes) FAD-binding 8, and Protein of unknown function DUF3112 network (Exserohilum turcica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R0ICA7_SETT2	Uncharacterized protein. (560 aa)
	R0IQY5_SETT2	FAD-binding FR-type domain-containing protein. (507 aa)
	R0IUI7_SETT2	FAD-binding FR-type domain-containing protein. (681 aa)
	R0IYK5_SETT2	FAD-binding FR-type domain-containing protein. (562 aa)
	R0IZL4_SETT2	FAD-binding FR-type domain-containing protein. (641 aa)
	R0K303_SETT2	Uncharacterized protein. (759 aa)
	R0K5N0_SETT2	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (504 aa)
	R0KEG2_SETT2	FAD-binding FR-type domain-containing protein. (549 aa)
	R0KFH3_SETT2	Uncharacterized protein. (526 aa)
	R0KIC6_SETT2	FAD-binding FR-type domain-containing protein. (615 aa)

Your Current Organism:

Exserohilum turcica

NCBI taxonomy Id: 671987
Other names: E. turcica Et28A, Exserohilum turcica Et28A, Setosphaeria turcica Et28A

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R0ICA7_SETT2	R0IQY5_SETT2	R0ICA7	R0IQY5	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.616
R0ICA7_SETT2	R0IUI7_SETT2	R0ICA7	R0IUI7	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.616
R0ICA7_SETT2	R0IYK5_SETT2	R0ICA7	R0IYK5	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.734
R0ICA7_SETT2	R0IZL4_SETT2	R0ICA7	R0IZL4	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.616
R0ICA7_SETT2	R0K5N0_SETT2	R0ICA7	R0K5N0	Uncharacterized protein.	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.638
R0ICA7_SETT2	R0KEG2_SETT2	R0ICA7	R0KEG2	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.755
R0ICA7_SETT2	R0KIC6_SETT2	R0ICA7	R0KIC6	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.616
R0IQY5_SETT2	R0ICA7_SETT2	R0IQY5	R0ICA7	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.616
R0IQY5_SETT2	R0K303_SETT2	R0IQY5	R0K303	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IQY5_SETT2	R0KFH3_SETT2	R0IQY5	R0KFH3	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IUI7_SETT2	R0ICA7_SETT2	R0IUI7	R0ICA7	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.616
R0IUI7_SETT2	R0K303_SETT2	R0IUI7	R0K303	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IUI7_SETT2	R0KFH3_SETT2	R0IUI7	R0KFH3	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IYK5_SETT2	R0ICA7_SETT2	R0IYK5	R0ICA7	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.734
R0IYK5_SETT2	R0K303_SETT2	R0IYK5	R0K303	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IYK5_SETT2	R0KFH3_SETT2	R0IYK5	R0KFH3	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IZL4_SETT2	R0ICA7_SETT2	R0IZL4	R0ICA7	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.616
R0IZL4_SETT2	R0K303_SETT2	R0IZL4	R0K303	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0IZL4_SETT2	R0KFH3_SETT2	R0IZL4	R0KFH3	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.463
R0K303_SETT2	R0IQY5_SETT2	R0K303	R0IQY5	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.463