(5 nodes) Ctr copper transporter network (Exserohilum turcica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R0IJ43_SETT2	Uncharacterized protein. (220 aa)
	R0IU16_SETT2	Uncharacterized protein. (189 aa)
	R0J133_SETT2	Uncharacterized protein. (154 aa)
	R0K7F9_SETT2	Uncharacterized protein. (164 aa)
	R0KDA3_SETT2	Uncharacterized protein. (189 aa)

Your Current Organism:

Exserohilum turcica

NCBI taxonomy Id: 671987
Other names: E. turcica Et28A, Exserohilum turcica Et28A, Setosphaeria turcica Et28A

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R0IJ43_SETT2	R0J133_SETT2	R0IJ43	R0J133	Uncharacterized protein.	Uncharacterized protein.	0.454
R0IJ43_SETT2	R0K7F9_SETT2	R0IJ43	R0K7F9	Uncharacterized protein.	Uncharacterized protein.	0.596
R0IJ43_SETT2	R0KDA3_SETT2	R0IJ43	R0KDA3	Uncharacterized protein.	Uncharacterized protein.	0.454
R0IU16_SETT2	R0J133_SETT2	R0IU16	R0J133	Uncharacterized protein.	Uncharacterized protein.	0.454
R0IU16_SETT2	R0K7F9_SETT2	R0IU16	R0K7F9	Uncharacterized protein.	Uncharacterized protein.	0.596
R0IU16_SETT2	R0KDA3_SETT2	R0IU16	R0KDA3	Uncharacterized protein.	Uncharacterized protein.	0.454
R0J133_SETT2	R0IJ43_SETT2	R0J133	R0IJ43	Uncharacterized protein.	Uncharacterized protein.	0.454
R0J133_SETT2	R0IU16_SETT2	R0J133	R0IU16	Uncharacterized protein.	Uncharacterized protein.	0.454
R0K7F9_SETT2	R0IJ43_SETT2	R0K7F9	R0IJ43	Uncharacterized protein.	Uncharacterized protein.	0.596
R0K7F9_SETT2	R0IU16_SETT2	R0K7F9	R0IU16	Uncharacterized protein.	Uncharacterized protein.	0.596
R0KDA3_SETT2	R0IJ43_SETT2	R0KDA3	R0IJ43	Uncharacterized protein.	Uncharacterized protein.	0.454
R0KDA3_SETT2	R0IU16_SETT2	R0KDA3	R0IU16	Uncharacterized protein.	Uncharacterized protein.	0.454