(17 nodes) Heme metabolic process network (Exserohilum turcica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R0KGR8_SETT2	Uncharacterized protein. (398 aa)
	R0KTJ6_SETT2	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (376 aa)
	R0KSH2_SETT2	Uncharacterized protein. (144 aa)
	R0I7M0_SETT2	Uncharacterized protein. (274 aa)
	R0I905_SETT2	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (318 aa)
	R0IDD9_SETT2	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (598 aa)
	R0IFK4_SETT2	2Fe-2S ferredoxin-type domain-containing protein. (170 aa)
	R0IUA1_SETT2	Uncharacterized protein. (504 aa)
	R0IX85_SETT2	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (622 aa)
	R0JJE5_SETT2	Uncharacterized protein; Belongs to the precorrin methyltransferase family. (550 aa)
	R0JLQ0_SETT2	Aminotran_1_2 domain-containing protein. (486 aa)
	R0JTV4_SETT2	Uncharacterized protein. (381 aa)
	R0JW51_SETT2	HEM4 domain-containing protein. (678 aa)
	R0JZE4_SETT2	Uncharacterized protein. (240 aa)
	R0K582_SETT2	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (429 aa)
	R0K5P6_SETT2	Uncharacterized protein. (340 aa)
	R0KA66_SETT2	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (365 aa)

Your Current Organism:

Exserohilum turcica

NCBI taxonomy Id: 671987
Other names: E. turcica Et28A, Exserohilum turcica Et28A, Setosphaeria turcica Et28A

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R0I7M0_SETT2	R0IFK4_SETT2	R0I7M0	R0IFK4	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.817
R0I7M0_SETT2	R0IUA1_SETT2	R0I7M0	R0IUA1	Uncharacterized protein.	Uncharacterized protein.	0.989
R0I7M0_SETT2	R0JTV4_SETT2	R0I7M0	R0JTV4	Uncharacterized protein.	Uncharacterized protein.	0.781
R0I7M0_SETT2	R0JW51_SETT2	R0I7M0	R0JW51	Uncharacterized protein.	HEM4 domain-containing protein.	0.472
R0I7M0_SETT2	R0K582_SETT2	R0I7M0	R0K582	Uncharacterized protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.898
R0I7M0_SETT2	R0K5P6_SETT2	R0I7M0	R0K5P6	Uncharacterized protein.	Uncharacterized protein.	0.552
R0I7M0_SETT2	R0KA66_SETT2	R0I7M0	R0KA66	Uncharacterized protein.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.552
R0I7M0_SETT2	R0KGR8_SETT2	R0I7M0	R0KGR8	Uncharacterized protein.	Uncharacterized protein.	0.566
R0I7M0_SETT2	R0KTJ6_SETT2	R0I7M0	R0KTJ6	Uncharacterized protein.	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	0.554
R0I905_SETT2	R0IDD9_SETT2	R0I905	R0IDD9	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.473
R0I905_SETT2	R0IX85_SETT2	R0I905	R0IX85	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	0.437
R0I905_SETT2	R0JW51_SETT2	R0I905	R0JW51	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.	HEM4 domain-containing protein.	0.476
R0I905_SETT2	R0KA66_SETT2	R0I905	R0KA66	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.422
R0IDD9_SETT2	R0I905_SETT2	R0IDD9	R0I905	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.	0.473
R0IDD9_SETT2	R0IUA1_SETT2	R0IDD9	R0IUA1	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	Uncharacterized protein.	0.579
R0IDD9_SETT2	R0IX85_SETT2	R0IDD9	R0IX85	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	0.553
R0IDD9_SETT2	R0JJE5_SETT2	R0IDD9	R0JJE5	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	Uncharacterized protein; Belongs to the precorrin methyltransferase family.	0.550
R0IDD9_SETT2	R0JLQ0_SETT2	R0IDD9	R0JLQ0	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	Aminotran_1_2 domain-containing protein.	0.402
R0IDD9_SETT2	R0JTV4_SETT2	R0IDD9	R0JTV4	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	Uncharacterized protein.	0.472
R0IDD9_SETT2	R0JW51_SETT2	R0IDD9	R0JW51	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	HEM4 domain-containing protein.	0.785