STRINGSTRING
AIL69120.1 AIL69120.1 fadA fadA fadB fadB ilvC ilvC pckA pckA AIL69435.1 AIL69435.1 mdh mdh leuD leuD leuC leuC leuB leuB leuA leuA AIL69558.1 AIL69558.1 ilvH ilvH AIL69563.1 AIL69563.1 grcA grcA AIL69783.1 AIL69783.1 AIL69784.1 AIL69784.1 gltA gltA sdhC sdhC sdhD sdhD sdhA sdhA sdhB sdhB sucA sucA sucB sucB sucC sucC sucD sucD AIL70186.1 AIL70186.1 AIL70297.1 AIL70297.1 AIL70438.1 AIL70438.1 AIL70442.1 AIL70442.1 sfcA sfcA AIL70524.1 AIL70524.1 prpB prpB AIL70526.1 AIL70526.1 AIL70527.1 AIL70527.1 AIL70528.1 AIL70528.1 AIL70529.1 AIL70529.1 acyP acyP AIL70804.1 AIL70804.1 AIL70907.1 AIL70907.1 AIL70908.1 AIL70908.1 AIL70925.1 AIL70925.1 ackA1 ackA1 AIL70976.1 AIL70976.1 AIL70993.1 AIL70993.1 AIL71113.1 AIL71113.1 AIL71130.1 AIL71130.1 pflA pflA fadJ fadJ fadI fadI AIL71322.1 AIL71322.1 AIL71544.1 AIL71544.1 AIL71561.1 AIL71561.1 aceF aceF aceE aceE AIL71587.1 AIL71587.1 AIL71588.1 AIL71588.1 oadG oadG ppc ppc AIL71810.1 AIL71810.1 AIL71892.1 AIL71892.1 AIL71893.1 AIL71893.1 frdC frdC frdD frdD acsA acsA AIL72030.1 AIL72030.1 ilvM ilvM ilvE ilvE ilvD ilvD ilvA ilvA potE potE AIL72331.1 AIL72331.1 AIL72493.1 AIL72493.1 AIL72503.1 AIL72503.1 AIL72514.1 AIL72514.1 AIL72562.1 AIL72562.1 AIL72581.1 AIL72581.1 AIL72582.1 AIL72582.1 AIL72583.1 AIL72583.1 AIL72594.1 AIL72594.1 ackA2 ackA2 gcvP gcvP AIL72765.1 AIL72765.1 AIL72829.1 AIL72829.1 AIL73008.1 AIL73008.1 pdhA pdhA pdhB pdhB pdhC pdhC etfA etfA etfB etfB AIL73025.1 AIL73025.1 AIL73036.1 AIL73036.1 AIL73037.1 AIL73037.1 AIL73038.1 AIL73038.1 AIL73039.1 AIL73039.1 AIL73040.1 AIL73040.1 AIL73041.1 AIL73041.1 AIL73044.1 AIL73044.1 AIL73045.1 AIL73045.1 AIL73046.1 AIL73046.1 AIL73047.1 AIL73047.1 AIL73190.1 AIL73190.1 AIL73191.1 AIL73191.1 AIL73192.1 AIL73192.1 AIL73193.1 AIL73193.1 AIL73305.1 AIL73305.1
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIL69120.1Zn-binding alcohol dehydrogenase. (326 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
fadBMultifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (723 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (494 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (542 aa)
AIL69435.1Acyl dehydratase. (140 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (310 aa)
leuDIsopropylmalate isomerase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa)
leuCIsopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (466 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily. (363 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (515 aa)
AIL69558.1Acetolactate synthase 3 catalytic subunit. (574 aa)
ilvHAcetolactate synthase 3 regulatory subunit. (164 aa)
AIL69563.1Pyruvate kinase; Belongs to the pyruvate kinase family. (470 aa)
grcAAutonomous glycyl radical cofactor GrcA; Acts as a radical domain for damaged PFL and possibly other radical proteins. (125 aa)
AIL69783.1Malate synthase; Belongs to the malate synthase family. (545 aa)
AIL69784.1Isocitrate lyase. (437 aa)
gltAType II citrate synthase; Belongs to the citrate synthase family. (429 aa)
sdhCSuccinate dehydrogenase cytochrome b556 large membrane subunit. (130 aa)
sdhDSuccinate dehydrogenase, hydrophobic anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (114 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
sdhBSuccinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (236 aa)
sucA2-oxoglutarate dehydrogenase E1 component. (941 aa)
sucBDihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (402 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
AIL70186.1Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (891 aa)
AIL70297.1Pyruvate kinase; Belongs to the pyruvate kinase family. (482 aa)
AIL70438.1acyl-CoA dehydrogenase. (761 aa)
AIL70442.1Alcohol dehydrogenase. (415 aa)
sfcAMalate dehydrogenase (oxaloacetate-decarboxylating); Belongs to the malic enzymes family. (562 aa)
AIL70524.1Transcriptional regulator. (231 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (298 aa)
AIL70526.1Methylcitrate synthase; Belongs to the citrate synthase family. (380 aa)
AIL70527.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (866 aa)
AIL70528.13-methylitaconate isomerase. (408 aa)
AIL70529.1PrpE protein. (626 aa)
acyPAcylphosphatase. (90 aa)
AIL70804.1Fe-S oxidoreductase. (1014 aa)
AIL70907.1Pyruvate-formate lyase-activating enzyme. (192 aa)
AIL70908.1Hypothetical protein. (519 aa)
AIL70925.1Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
ackA1Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
AIL70976.1Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (714 aa)
AIL70993.1D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (331 aa)
AIL71113.1Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (741 aa)
AIL71130.1Formate acetyltransferase. (758 aa)
pflAPyruvate formate lyase-activating enzyme 1; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa)
fadJMultifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (705 aa)
fadI3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (435 aa)
AIL71322.1acyl-CoA dehydrogenase. (815 aa)
AIL71544.1Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family. (865 aa)
AIL71561.1Dihydrolipoamide dehydrogenase. (475 aa)
aceFDihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (630 aa)
aceEPyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (886 aa)
AIL71587.1Oxaloacetate decarboxylase subunit beta; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (376 aa)
AIL71588.1Oxaloacetate decarboxylase. (594 aa)
oadGOxaloacetate decarboxylase subunit gamma; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation. (85 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (877 aa)
AIL71810.1Malic enzyme. (425 aa)
AIL71892.1Fumarate reductase flavoprotein subunit. (605 aa)
AIL71893.1Fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (252 aa)
frdCFumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (127 aa)
frdDFumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (125 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (650 aa)
AIL72030.1Acetolactate synthase 2 catalytic subunit. (548 aa)
ilvMAcetolactate synthase 2 regulatory subunit. (94 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (312 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (613 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (509 aa)
potEPutrescine transporter; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. (436 aa)
AIL72331.1Lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (318 aa)
AIL72493.13-hydroxyisobutyrate dehydrogenase. (291 aa)
AIL72503.1Malate synthase. (190 aa)
AIL72514.1Lipoate-protein ligase A. (235 aa)
AIL72562.1Glycerol dehydrogenase. (362 aa)
AIL72581.1Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (790 aa)
AIL72582.1PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. (277 aa)
AIL72583.1Hypothetical protein. (337 aa)
AIL72594.1Alcohol dehydrogenase. (382 aa)
ackA2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (954 aa)
AIL72765.1Pyruvate kinase; Belongs to the pyruvate kinase family. (489 aa)
AIL72829.1acyl-CoA synthetase. (892 aa)
AIL73008.1acetoacetyl-CoA synthetase. (658 aa)
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (364 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta. (327 aa)
pdhCPyruvate dehydrogenase E2 component. (381 aa)
etfAElectron transfer flavoprotein subunit alpha. (321 aa)
etfBElectron transfer flavoprotein subunit beta. (258 aa)
AIL73025.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (555 aa)
AIL73036.13-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (302 aa)
AIL73037.1enoyl-CoA hydratase/isomerase. (375 aa)
AIL73038.1enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (265 aa)
AIL73039.1acyl-CoA dehydrogenase. (384 aa)
AIL73040.1NAD-dependent aldehyde dehydrogenase. (497 aa)
AIL73041.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (405 aa)
AIL73044.1acyl-CoA dehydrogenase. (389 aa)
AIL73045.1acetyl-CoA carboxylase, carboxyltransferase component. (534 aa)
AIL73046.1enoyl-CoA hydratase/isomerase. (269 aa)
AIL73047.1hydroxymethylglutaryl-CoA lyase. (305 aa)
AIL73190.1Poly(3-hydroxyalkanoate) synthetase. (590 aa)
AIL73191.1Phasin family protein. (115 aa)
AIL73192.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
AIL73193.1acetoacetyl-CoA reductase. (246 aa)
AIL73305.1NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (506 aa)
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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