73 items (Vibrio vulnificus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIL69275.1	Methyltransferase-like protein. (212 aa)
	yihI	Aminotransferase; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. (181 aa)
	AIL69277.1	Coproporphyrinogen III oxidase. (162 aa)
	AIL69282.1	Nitrogen regulation protein NR. (178 aa)
	AIL69294.1	Type II secretory pathway, component EpsC. (309 aa)
	AIL69295.1	Type II secretory pathway, component EpsD. (673 aa)
	AIL69296.1	Type II secretory pathway, ATPase EpsE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (499 aa)
	AIL69297.1	Type II secretory pathway, component EpsF. (405 aa)
	AIL69298.1	Type II secretory pathway, pseudopilin EpsG. (147 aa)
	AIL69299.1	Type II secretory pathway, pseudopilin EpsH. (200 aa)
	AIL69300.1	Type II secretory pathway, pseudopilin EpsI. (120 aa)
	AIL69301.1	Type II secretory pathway, component EpsJ. (233 aa)
	AIL69302.1	Type II secretory pathway, component EpsK. (340 aa)
	AIL69303.1	Type II secretory pathway, component EpsL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (399 aa)
	AIL69304.1	Type II secretory pathway, component EpsM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (163 aa)
	AIL69305.1	Type II secretion pathway protein N. (253 aa)
	AIL69484.1	Hypothetical protein. (300 aa)
	flgT	Flagellar protein FlgT. (377 aa)
	AIL69975.1	Membrane protein. (211 aa)
	AIL69976.1	Hypothetical protein. (143 aa)
	flgN	Flagellar biosynthesis chaperone FlgN. (141 aa)
	AIL70034.1	Membrane protein. (73 aa)
	AIL70125.1	Membrane protein. (186 aa)
	AIL70160.1	Hypothetical protein. (279 aa)
	AIL70183.1	V10 pilin. (173 aa)
	AIL70321.1	DNA repair ATPase. (254 aa)
	AIL70698.1	Hypothetical protein. (88 aa)
	AIL70704.1	Topoisomerase II. (114 aa)
	AIL70708.1	Hypothetical protein. (67 aa)
	AIL70879.1	V10 pilin. (163 aa)
	AIL70956.1	Hypothetical protein. (222 aa)
	AIL71025.1	Chemotaxis protein. (243 aa)
	AIL71026.1	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
	AIL71028.1	MSHA biogenesis protein MshA. (178 aa)
	AIL71134.1	Membrane protein. (221 aa)
	AIL71150.1	Hypothetical protein. (189 aa)
	AIL71223.1	RNA polymerase sigma factor. (191 aa)
	AIL71224.1	Chemotaxis protein. (243 aa)
	AIL71237.1	DNA repair ATPase. (166 aa)
	soj	Soj-like and chromosome partitioning protein. (258 aa)
	AIL71472.1	Pilus protein PilZ. (782 aa)
	AIL71726.1	Zn-dependent protease. (481 aa)
	AIL71727.1	Amidohydrolase. (274 aa)
	AIL71728.1	Membrane protein. (1295 aa)
	AIL71729.1	Ribonuclease G. (489 aa)
	maf-2	Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (186 aa)
	mreD	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. (162 aa)
	mreC	Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (296 aa)
	mreB	Rod shape-determining protein MreB. (347 aa)
	AIL71734.1	MSHA biogenesis protein MshQ. (1421 aa)
	AIL71735.1	MSHA biogenesis protein MshP. (138 aa)
	AIL71736.1	MSHA biogenesis protein MshO. (229 aa)
	AIL71737.1	MSHA pilin protein MshD. (188 aa)
	AIL71738.1	MSHA pilin protein MshC. (165 aa)
	AIL71739.1	MSHA pilin protein MshA. (156 aa)
	AIL71740.1	MSHA pilin protein MshB. (192 aa)
	AIL71741.1	MSHA biogenesis protein MshF. (153 aa)
	AIL71742.1	MSHA biogenesis protein MshG. (406 aa)
	AIL71743.1	MSHA biogenesis protein MshE. (574 aa)
	AIL71744.1	MSHA biogenesis protein MshN. (377 aa)
	AIL71745.1	MSHA biogenesis protein MshM. (282 aa)
	AIL71746.1	MSHA biogenesis protein MshL. (548 aa)
	AIL71747.1	MSHA biogenesis protein MshK. (106 aa)
	AIL71748.1	MSHA biogenesis protein MshJ. (216 aa)
	AIL71749.1	MSHA biogenesis protein MshI. (486 aa)
	AIL71865.1	Sodium-type flagellar motor component. (211 aa)
	AIL72494.1	Histidine kinase. (157 aa)
	AIL72800.1	Lipase. (825 aa)
	AIL72937.1	Polymer-forming cytoskeletal family protein. (995 aa)
	AIL72963.1	MSHA pilin protein MshA. (184 aa)
	AIL73107.1	Hypothetical protein. (74 aa)
	AIL73168.1	Diguanylate cyclase. (146 aa)
	AIL73590.1	Polymerase. (557 aa)

Your Current Organism:

Vibrio vulnificus

NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIL69275.1	AIL69277.1	VV93_v1c01760	VV93_v1c01780	Methyltransferase-like protein.	Coproporphyrinogen III oxidase.	0.795
AIL69275.1	yihI	VV93_v1c01760	VV93_v1c01770	Methyltransferase-like protein.	Aminotransferase; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.	0.800
AIL69277.1	AIL69275.1	VV93_v1c01780	VV93_v1c01760	Coproporphyrinogen III oxidase.	Methyltransferase-like protein.	0.795
AIL69277.1	AIL69282.1	VV93_v1c01780	VV93_v1c01830	Coproporphyrinogen III oxidase.	Nitrogen regulation protein NR.	0.433
AIL69277.1	AIL69294.1	VV93_v1c01780	VV93_v1c01950	Coproporphyrinogen III oxidase.	Type II secretory pathway, component EpsC.	0.560
AIL69277.1	AIL69299.1	VV93_v1c01780	VV93_v1c02000	Coproporphyrinogen III oxidase.	Type II secretory pathway, pseudopilin EpsH.	0.727
AIL69277.1	AIL69301.1	VV93_v1c01780	VV93_v1c02020	Coproporphyrinogen III oxidase.	Type II secretory pathway, component EpsJ.	0.448
AIL69277.1	AIL69303.1	VV93_v1c01780	VV93_v1c02040	Coproporphyrinogen III oxidase.	Type II secretory pathway, component EpsL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.722
AIL69277.1	AIL69304.1	VV93_v1c01780	VV93_v1c02050	Coproporphyrinogen III oxidase.	Type II secretory pathway, component EpsM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.721
AIL69277.1	AIL69305.1	VV93_v1c01780	VV93_v1c02060	Coproporphyrinogen III oxidase.	Type II secretion pathway protein N.	0.746
AIL69277.1	AIL69484.1	VV93_v1c01780	VV93_v1c03850	Coproporphyrinogen III oxidase.	Hypothetical protein.	0.760
AIL69277.1	AIL69975.1	VV93_v1c01780	VV93_v1c08810	Coproporphyrinogen III oxidase.	Membrane protein.	0.647
AIL69277.1	AIL69976.1	VV93_v1c01780	VV93_v1c08820	Coproporphyrinogen III oxidase.	Hypothetical protein.	0.628
AIL69277.1	AIL70034.1	VV93_v1c01780	VV93_v1c09400	Coproporphyrinogen III oxidase.	Membrane protein.	0.743
AIL69277.1	AIL70125.1	VV93_v1c01780	VV93_v1c10310	Coproporphyrinogen III oxidase.	Membrane protein.	0.499
AIL69277.1	AIL70160.1	VV93_v1c01780	VV93_v1c10670	Coproporphyrinogen III oxidase.	Hypothetical protein.	0.722
AIL69277.1	AIL70321.1	VV93_v1c01780	VV93_v1c12310	Coproporphyrinogen III oxidase.	DNA repair ATPase.	0.770
AIL69277.1	AIL70698.1	VV93_v1c01780	VV93_v1c16100	Coproporphyrinogen III oxidase.	Hypothetical protein.	0.617
AIL69277.1	AIL70704.1	VV93_v1c01780	VV93_v1c16160	Coproporphyrinogen III oxidase.	Topoisomerase II.	0.698
AIL69277.1	AIL70708.1	VV93_v1c01780	VV93_v1c16200	Coproporphyrinogen III oxidase.	Hypothetical protein.	0.634

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