Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIL69677.1 | AIL70616.1 | VV93_v1c05800 | VV93_v1c15260 | Glutamate synthase. | NAD-specific glutamate dehydrogenase. | 0.934 |
| AIL69677.1 | gcvP | VV93_v1c05800 | VV93_v1c36900 | Glutamate synthase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.900 |
| AIL69677.1 | gltB | VV93_v1c05800 | VV93_v1c05780 | Glutamate synthase. | Glutamate synthase subunit alpha. | 0.999 |
| AIL69677.1 | gltD-2 | VV93_v1c05800 | VV93_v1c05790 | Glutamate synthase. | Glutamate synthase subunit beta. | 0.999 |
| AIL70324.1 | gcvP | VV93_v1c12340 | VV93_v1c36900 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.478 |
| AIL70616.1 | AIL69677.1 | VV93_v1c15260 | VV93_v1c05800 | NAD-specific glutamate dehydrogenase. | Glutamate synthase. | 0.934 |
| AIL70616.1 | gcvP | VV93_v1c15260 | VV93_v1c36900 | NAD-specific glutamate dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.872 |
| AIL70616.1 | gltB | VV93_v1c15260 | VV93_v1c05780 | NAD-specific glutamate dehydrogenase. | Glutamate synthase subunit alpha. | 0.934 |
| AIL70616.1 | gltD-2 | VV93_v1c15260 | VV93_v1c05790 | NAD-specific glutamate dehydrogenase. | Glutamate synthase subunit beta. | 0.907 |
| gcvP | AIL69677.1 | VV93_v1c36900 | VV93_v1c05800 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase. | 0.900 |
| gcvP | AIL70324.1 | VV93_v1c36900 | VV93_v1c12340 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.478 |
| gcvP | AIL70616.1 | VV93_v1c36900 | VV93_v1c15260 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | NAD-specific glutamate dehydrogenase. | 0.872 |
| gcvP | gltB | VV93_v1c36900 | VV93_v1c05780 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase subunit alpha. | 0.900 |
| gcvP | gltD-2 | VV93_v1c36900 | VV93_v1c05790 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase subunit beta. | 0.808 |
| gcvP | pdxH | VV93_v1c36900 | VV93_v1c45120 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.558 |
| gltB | AIL69677.1 | VV93_v1c05780 | VV93_v1c05800 | Glutamate synthase subunit alpha. | Glutamate synthase. | 0.999 |
| gltB | AIL70616.1 | VV93_v1c05780 | VV93_v1c15260 | Glutamate synthase subunit alpha. | NAD-specific glutamate dehydrogenase. | 0.934 |
| gltB | gcvP | VV93_v1c05780 | VV93_v1c36900 | Glutamate synthase subunit alpha. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.900 |
| gltB | gltD-2 | VV93_v1c05780 | VV93_v1c05790 | Glutamate synthase subunit alpha. | Glutamate synthase subunit beta. | 0.999 |
| gltD-2 | AIL69677.1 | VV93_v1c05790 | VV93_v1c05800 | Glutamate synthase subunit beta. | Glutamate synthase. | 0.999 |
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