STRINGSTRING
SMD44_08476 SMD44_08476 SMD44_08477 SMD44_08477 SMD44_08478 SMD44_08478 SMD44_08479 SMD44_08479 SMD44_08480 SMD44_08480 rbsB rbsB xylF xylF xylG xylG xylH xylH rbsB-2 rbsB-2 rbsC rbsC rbsA rbsA lacI-2 lacI-2 rbsA-2 rbsA-2 rbsB-3 rbsB-3 rbsK rbsK rbsD rbsD SMD44_00678 SMD44_00678 rbsA-3 rbsA-3 rbsC-2 rbsC-2 SMD44_00675 SMD44_00675 rbsB-4 rbsB-4 SMD44_00673 SMD44_00673 SMD44_02649 SMD44_02649 rbsB-6 rbsB-6 rbsA-4 rbsA-4 rbsC-3 rbsC-3 rbsC-4 rbsC-4 SMD44_08788 SMD44_08788 rbsK-2 rbsK-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMD44_08476Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (409 aa)
SMD44_08477Unannotated protein. (534 aa)
SMD44_08478Unannotated protein. (367 aa)
SMD44_08479Unannotated protein. (322 aa)
SMD44_08480Unannotated protein. (361 aa)
rbsBUnannotated protein. (351 aa)
xylFUnannotated protein. (365 aa)
xylGUnannotated protein. (266 aa)
xylHUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (438 aa)
rbsB-2Unannotated protein. (347 aa)
rbsCUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (339 aa)
rbsAUnannotated protein. (528 aa)
lacI-2Unannotated protein. (361 aa)
rbsA-2Unannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (559 aa)
rbsB-3Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (657 aa)
rbsKUnannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (302 aa)
rbsDUnannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)
SMD44_00678Unannotated protein. (407 aa)
rbsA-3Unannotated protein. (541 aa)
rbsC-2Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
SMD44_00675Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (368 aa)
rbsB-4Unannotated protein. (415 aa)
SMD44_00673Unannotated protein. (297 aa)
SMD44_02649Unannotated protein. (264 aa)
rbsB-6Unannotated protein. (374 aa)
rbsA-4Unannotated protein. (523 aa)
rbsC-3Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (321 aa)
rbsC-4Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
SMD44_08788Unannotated protein. (311 aa)
rbsK-2Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (301 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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