STRINGSTRING
SMD44_05486 SMD44_05486 SMD44_05485 SMD44_05485 SMD44_00675 SMD44_00675 rbsC-2 rbsC-2 rbsB-3 rbsB-3 rbsC rbsC xylH xylH SMD44_08476 SMD44_08476 SMD44_07673 SMD44_07673 SMD44_06895 SMD44_06895 rbsC-3 rbsC-3 rbsC-4 rbsC-4 livM livM livH livH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMD44_05486Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (420 aa)
SMD44_05485Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (384 aa)
SMD44_00675Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (368 aa)
rbsC-2Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
rbsB-3Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (657 aa)
rbsCUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (339 aa)
xylHUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (438 aa)
SMD44_08476Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (409 aa)
SMD44_07673Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
SMD44_06895Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (350 aa)
rbsC-3Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (321 aa)
rbsC-4Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
livMUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (614 aa)
livHUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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