STRINGSTRING
serB-2 serB-2 SMD44_05553 SMD44_05553 relA-2 relA-2 serA-2 serA-2 SMD44_06124 SMD44_06124 tyrA2 tyrA2 SMD44_03272 SMD44_03272 pheA2 pheA2 relA relA SMD44_05899 SMD44_05899 purU purU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
serB-2Unannotated protein. (418 aa)
SMD44_05553Unannotated protein. (420 aa)
relA-2Unannotated protein. (715 aa)
serA-2Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (534 aa)
SMD44_06124Unannotated protein. (180 aa)
tyrA2Unannotated protein. (361 aa)
SMD44_03272Unannotated protein. (476 aa)
pheA2Unannotated protein. (311 aa)
relAUnannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (863 aa)
SMD44_05899Unannotated protein. (429 aa)
purUUnannotated protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (297 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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